RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 DIMT1Q9UNQ2 313 aaKnown RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MOKQ9UQ07 419 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 LSM5Q9Y4Y9 91 aaKnown RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 TRAPPC2LH3BP13 241 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 P2RX6O15547 441 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 OR1J2Q8NGS2 313 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 CPT1CQ8TCG5 803 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MSI2Q96DH6 328 aaKnown RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 SORCS2Q96PQ0 1159 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 PRMT8Q9NR22 394 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-207ENST00000494090 MMACHCQ9Y4U1 282 aa17.82■□□□□ 0.44
COL27A1-207ENST00000494090 A0A087WUU8 490 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 A6NIN4 97 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 F8W036 122 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 GAPDHSO14556 408 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 GABARAPO95166 117 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 BLOC1S1P78537 153 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 POU3F1Q03052 451 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 EID2Q8N6I1 236 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 CNEP1R1Q8N9A8 125 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 OR13C2Q8NGS9 318 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 RLN3Q8WXF3 142 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 CXorf36Q9H7Y0 433 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 NPAP1Q9NZP6 1156 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 DVL2O14641 736 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 CHTF18Q8WVB6 975 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 CAMK2AQ9UQM7 478 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 A0A1B0GTW7 788 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 CHRM4P08173 479 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 LUMP51884 338 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 TAS2R19P59542 299 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 SYT6Q5T7P8 510 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 VRK3Q8IV63 474 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 SLC7A5P1Q8MH63 180 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 ARRDC3Q96B67 414 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF681Q96N22 645 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 ULBP3Q9BZM4 244 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 PRSS16Q9NQE7 514 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 FBXO7Q9Y3I1 522 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 OR5K3A6NET4 321 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 RPS25P62851 125 aaKnown RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 DCDP81605 110 aaKnown RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 NLRP8Q86W28 1048 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 UTP23Q9BRU9 249 aaKnown RBP17.81■□□□□ 0.44
COL27A1-207ENST00000494090 P2RY12Q9H244 342 aa17.81■□□□□ 0.44
COL27A1-207ENST00000494090 SYT5O00445 386 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 AFF3P51826 1226 aaKnown RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 LTBQ06643 244 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 NRARPQ7Z6K4 114 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 C12orf45Q8N5I9 185 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 LMNTD1Q8N9Z9 388 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 MYLIPQ8WY64 445 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 PTTG3PQ9NZH4 202 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 LRFN1Q9P244 771 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 KIF25Q9UIL4 384 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 CACNG3O60359 315 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 FZD7O75084 574 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 PRKACBP22694 351 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 CASP3P42574 277 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 SSR4P51571 173 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 PFN3P60673 137 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 HBMQ6B0K9 141 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 UCN3Q969E3 161 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 TM4SF18Q96CE8 201 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 ELP4Q96EB1 424 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 FER1L6-AS2Q96M78 137 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF436Q9C0F3 470 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 NUMBLQ9Y6R0 609 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF44P15621 663 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 ELAVL4P26378 380 aaKnown RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 RPL34P49207 117 aaKnown RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 SLC35A1P78382 337 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 AGAP7PQ5VUJ5 663 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 NXNL2Q5VZ03 156 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 TSSK4Q6SA08 328 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 GRAMD2AQ8IUY3 354 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 TEX37Q96LM6 180 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 VN1R3Q9BXE9 311 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 MYO18AQ92614 2054 aaKnown RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 LILRB5O75023 590 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 MMP12P39900 470 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 TSFMP43897 325 aaKnown RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 COX20Q5RI15 118 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 KDM4DQ6B0I6 523 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 SULF2Q8IWU5 870 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 OR11L1Q8NGX0 322 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 ZFPM2Q8WW38 1151 aa17.8■□□□□ 0.44
COL27A1-207ENST00000494090 TXNL4BQ9NX01 149 aaKnown RBP17.8■□□□□ 0.44
COL27A1-207ENST00000494090 MEIS3P1A6NDR6 274 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 NCR1O76036 304 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 EPHA1P21709 976 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 MSMO1Q15800 293 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 TBPL2Q6SJ96 375 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 GLB1L2Q8IW92 636 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 OR1J4Q8NGS1 313 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ZBTB8AQ96BR9 441 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SIT1Q9Y3P8 196 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms