RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 OIT3Q8WWZ8 545 aa10.76□□□□□ -0.69
SAMM50-205ENST00000493621 CNOT9Q92600 299 aaKnown RBP10.76□□□□□ -0.69
SAMM50-205ENST00000493621 ROPN1LQ96C74 230 aa10.76□□□□□ -0.69
SAMM50-205ENST00000493621 DDIT4LQ96D03 193 aa10.76□□□□□ -0.69
SAMM50-205ENST00000493621 SAP130Q9H0E3 1048 aa10.76□□□□□ -0.69
SAMM50-205ENST00000493621 EXOSC3Q9NQT5 275 aaKnown RBP10.76□□□□□ -0.69
SAMM50-205ENST00000493621 POLE3Q9NRF9 147 aa10.76□□□□□ -0.69
SAMM50-205ENST00000493621 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.76□□□□□ -0.69
SAMM50-205ENST00000493621 PCDHGB4Q9UN71 923 aa10.76□□□□□ -0.69
SAMM50-205ENST00000493621 IGHV1-18A0A0C4DH31 117 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 RNASET2O00584 256 aaKnown RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 CPSF4O95639 269 aaKnown RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 GUSBP08236 651 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 ZNF23P17027 643 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 SERPINF1P36955 418 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 HTR3AP46098 478 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 KHKP50053 298 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 POLR2HP52434 150 aaKnown RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 MAD2L1Q13257 205 aaPredicted RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 SQLEQ14534 574 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 CR1LQ2VPA4 569 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 OTUD3Q5T2D3 398 aaPredicted RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 C1QTNF12Q5T7M4 302 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 LIPNQ5VXI9 398 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 AAED1Q7RTV5 226 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 SPATA19Q7Z5L4 167 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 ANKRD46Q86W74 232 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 PMM1Q92871 262 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 TMEM45BQ96B21 275 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 KCNS3Q9BQ31 491 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 SOX7Q9BT81 388 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 MYOZ1Q9NP98 299 aaPredicted RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 CA10Q9NS85 328 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 MKS1Q9NXB0 559 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 NOP53Q9NZM5 478 aaKnown RBP10.75□□□□□ -0.69
SAMM50-205ENST00000493621 OSGIN1Q9UJX0 560 aa10.75□□□□□ -0.69
SAMM50-205ENST00000493621 TLDC2A0PJX2 215 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 ZC3H12DA2A288 527 aaKnown RBP10.74□□□□□ -0.69
SAMM50-205ENST00000493621 ZNF208O43345 1280 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 SPAG7O75391 227 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 PGRP06401 933 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 UQCRC2P22695 453 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 TACR3P29371 465 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 SERPINB5P36952 375 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 HPCAP84074 193 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 EMX2Q04743 252 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 AP1ARQ63HQ0 302 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 SAXO2Q658L1 398 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 VHLLQ6RSH7 139 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 PAQR6Q6TCH4 344 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 TMEM99Q8N816 258 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 ZIC4Q8N9L1 334 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 OR9K2Q8NGE7 335 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 OR8J2Q8NGG1 315 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 AURKBQ96GD4 344 aaPredicted RBP10.74□□□□□ -0.69
SAMM50-205ENST00000493621 PPP1R36Q96LQ0 422 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 ZNF385AQ96PM9 386 aaKnown RBP10.74□□□□□ -0.69
SAMM50-205ENST00000493621 SLC38A2Q96QD8 506 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 ASIC5Q9NY37 505 aa10.74□□□□□ -0.69
SAMM50-205ENST00000493621 PRAMEF27A3QJZ7 478 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 LRP5LA4QPB2 252 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 B9A039 149 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 KRT33AO76009 404 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 AKR7A3O95154 331 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 LGI1O95970 557 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 CRYAAP02489 173 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 OR4A8P0C604 315 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 CHI3L1P36222 383 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-205ENST00000493621 GABPB1Q06547 395 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-205ENST00000493621 LGALS3BPQ08380 585 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 CEACAM7Q14002 265 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 OR7A5Q15622 319 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 ADIPOQQ15848 244 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 TBRG1Q3YBR2 411 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 ABHD12BQ7Z5M8 362 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-205ENST00000493621 GPAT4Q86UL3 456 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 POMGNT2Q8NAT1 580 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 ZNF540Q8NDQ6 660 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 OR1K1Q8NGR3 316 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 TCP10LQ8TDR4 215 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 NEURL3Q96EH8 262 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 C1orf159Q96HA4 380 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 DPY30Q9C005 99 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 OBP2BQ9NPH6 170 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 TMEM45AQ9NWC5 275 aa10.73□□□□□ -0.69
SAMM50-205ENST00000493621 MARCOQ9UEW3 520 aaPredicted RBP10.73□□□□□ -0.69
SAMM50-205ENST00000493621 PRSS51A0A1B0GVH4 220 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 LIPT2A6NK58 231 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 HMGN4O00479 90 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 NR5A2O00482 541 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 TCF21O43680 179 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 SCN2BO60939 215 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 STAMBPO95630 424 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 C1QCP02747 245 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 GPIP06744 558 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 SRP14P37108 136 aaKnown RBP10.72□□□□□ -0.69
SAMM50-205ENST00000493621 SLC1A3P43003 542 aa10.72□□□□□ -0.69
SAMM50-205ENST00000493621 PPOXP50336 477 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms