RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C17orf78Q8N4C9 275 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 C1orf162Q8NEQ5 155 aaPredicted RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 OR10H5Q8NGA6 315 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC35B4Q969S0 331 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 DDIT4LQ96D03 193 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 TRMT61AQ96FX7 289 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 SLCO5A1Q9H2Y9 848 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 MANSC1Q9H8J5 431 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 TPT1P8Q9HAU6 139 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 BCL2L10Q9HD36 194 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC52A3Q9NQ40 469 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 RLIMQ9NVW2 624 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 THUMPD1Q9NXG2 353 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 CISD1Q9NZ45 108 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 DCTN4Q9UJW0 460 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 MGAT4BQ9UQ53 548 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC9A8Q9Y2E8 581 aa7.36□□□□□ -1.23
SMARCB1-207ENST00000491967 A0A0G2JPF8 293 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 A0A1W2PP18 115 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 AQP7P3A6NL99 342 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 HNRNPCL2B2RXH8 293 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 HNRNPCL3B7ZW38 293 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 E7EQL1 145 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 ABCD4O14678 606 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 SMAD7O15105 426 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 HNRNPCL1O60812 293 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 HNRNPCL4P0DMR1 293 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 NR2F1P10589 423 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 IL7RP16871 459 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 TTKP33981 857 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 NME5P56597 212 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 OR2B6P58173 313 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 HPCAP84074 193 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 GNA13Q14344 377 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 BEND6Q5SZJ8 279 aaPredicted RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 ATG16L1Q676U5 607 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 EPGNQ6UW88 154 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 C6orf89Q6UWU4 347 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 ZNF836Q6ZNA1 936 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 PEX5LQ8IYB4 626 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 CLIP4Q8N3C7 705 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 OR52P1PQ8NH57 321 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 WDR60Q8WVS4 1066 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 GTF2H4Q92759 462 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 GTPBP3Q969Y2 492 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 ZBTB18Q99592 522 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 DHRS9Q9BPW9 319 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 NAA11Q9BSU3 229 aaPredicted RBP7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 REG4Q9BYZ8 158 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 CENPHQ9H3R5 247 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 TMBIM4Q9HC24 238 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC17A5Q9NRA2 495 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 SLC7A10Q9NS82 523 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM45AQ9NWC5 275 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 CALML5Q9NZT1 146 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 P2RX2Q9UBL9 471 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 ADAM21Q9UKJ8 722 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 B3GALT5Q9Y2C3 310 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 MALRD1Q5VYJ5 2156 aa7.35□□□□□ -1.23
SMARCB1-207ENST00000491967 FBN1P35555 2871 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 MXRA5Q9NR99 2828 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 STAB1Q9NY15 2570 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 A0A096LPI6 279 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 FAM234BA2RU67 622 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 A8MVM7 634 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 KIAA1324LA8MWY0 1029 aaPredicted RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 TMEM229AB2RXF0 380 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 INAFM1C9JVW0 142 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 FTCDNL1E5RQL4 147 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 H7C417 338 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 NDUFS7O75251 213 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 CRLF1O75462 422 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 RAD51DO75771 328 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 VAMP5O95183 116 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 IGHV3-9P01782 118 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 GPIP06744 558 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PRG2P13727 222 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ETFAP13804 333 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 UQCRBP14927 111 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 PAX7P23759 505 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 MPGP29372 298 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ACVR1BP36896 505 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 CDKN1AP38936 164 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 POLR2JP52435 117 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 CRISP3P54108 245 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 MAGOHP61326 146 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 IRX1P78414 480 aaPredicted RBP7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 FAPQ12884 760 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 RGNQ15493 299 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 STK11Q15831 433 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 NRF1Q16656 503 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 GTDC1Q4AE62 458 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 LIN52Q52LA3 116 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 LRIF1Q5T3J3 769 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 TSPO2Q5TGU0 170 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 AGAP6Q5VW22 663 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 WBP2NLQ6ICG8 309 aa7.34□□□□□ -1.23
SMARCB1-207ENST00000491967 ALKBH2Q6NS38 261 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms