RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 DNM1P46Q6ZS02 220 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 GPAT4Q86UL3 456 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 MSRB3Q8IXL7 192 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 ZNF525Q8N782 197 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 OR52P1PQ8NH57 321 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 SLC38A5Q8WUX1 472 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
HDAC3-211ENST00000491581 APH1AQ96BI3 265 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 TMEM19Q96HH6 336 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 TRNT1Q96Q11 434 aaKnown RBP7.81□□□□□ -1.16
HDAC3-211ENST00000491581 HDHD5Q9BXW7 423 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 REG4Q9BYZ8 158 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 OR10A4Q9H209 315 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 IKZF5Q9H5V7 419 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 CXorf56Q9H5V9 222 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 MANSC1Q9H8J5 431 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 SLCO1B3Q9NPD5 702 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 ADPRHL2Q9NX46 363 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 SLC25A37Q9NYZ2 338 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 TMEM181Q9P2C4 612 aa7.81□□□□□ -1.16
HDAC3-211ENST00000491581 ZNF443Q9Y2A4 671 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-211ENST00000491581 DSPPQ9NZW4 1301 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 NSD1Q96L73 2696 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 A0A096LNT2 108 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 CDHR4A6H8M9 788 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 ZNF503-AS2A6NEH8 195 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 CFAP73A6NFT4 308 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 TPST1O60507 370 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 MRPL33O75394 65 aaKnown RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 UPK3AO75631 287 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 SLC22A3O75751 556 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 SEC14L2O76054 403 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 LGI1O95970 557 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 CELA3BP08861 270 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 HOXB9P17482 250 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 CD40P25942 277 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 POLR2HP52434 150 aaKnown RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 CLNS1AP54105 237 aaKnown RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 DSTNP60981 165 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 CSNK2A1P68400 391 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 HPCAP84074 193 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 SLC17A1Q14916 467 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 PAGE3Q5JUK9 113 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 TIMM23BQ5SRD1 257 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 PHYHD1Q5SRE7 291 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 C6orf10Q5SRN2 563 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 AP1ARQ63HQ0 302 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 SLC22A25Q6T423 547 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 LRRC74BQ6ZQY2 392 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 SPATA19Q7Z5L4 167 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 FUNDC1Q8IVP5 155 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 TLCD1Q96CP7 247 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 ZNF837Q96EG3 531 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 RADILQ96JH8 1075 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 MAELQ96JY0 434 aaKnown RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 ALKBH3Q96Q83 286 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 ADAM19Q9H013 955 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 PAIP1Q9H074 479 aaKnown RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 TPT1P8Q9HAU6 139 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 TMBIM4Q9HC24 238 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 GP6Q9HCN6 339 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 EXOSC3Q9NQT5 275 aaKnown RBP7.8□□□□□ -1.16
HDAC3-211ENST00000491581 ASB6Q9NWX5 421 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 MOKQ9UQ07 419 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
HDAC3-211ENST00000491581 HEATR1Q9H583 2144 aaKnown RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 FBN1P35555 2871 aaKnown RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 A0A096LPE4 126 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 A0A1W2PPZ6 126 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 FAM234BA2RU67 622 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 LRRN3E7EW58 273 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 HTR2AP28223 471 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 MAGEA8P43361 318 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 RPS5P46782 204 aaKnown RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 POLR2JP52435 117 aaKnown RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 SLC16A1P53985 500 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 EGR4Q05215 589 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 SF3A3Q12874 501 aaKnown RBP eCLIP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 PDCD4Q53EL6 469 aaKnown RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 IL17RELQ6ZVW7 336 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 AAED1Q7RTV5 226 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 EPHX4Q8IUS5 362 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 LRRC34Q8IZ02 419 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 ZCCHC24Q8N2G6 241 aaKnown RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 ARIH2OSQ8N7S6 290 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 ANKS4BQ8N8V4 417 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 VPS37AQ8NEZ2 397 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 OR9K2Q8NGE7 335 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 NFKBIDQ8NI38 313 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 PIGXQ8TBF5 258 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 SLC25A43Q8WUT9 341 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 GTF2H4Q92759 462 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 C3orf49Q96BT1 292 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 SLC25A36Q96CQ1 311 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 MUCL1Q96DR8 90 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 KTI12Q96EK9 354 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-211ENST00000491581 MUS81Q96NY9 551 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 PTDSS2Q9BVG9 487 aa7.79□□□□□ -1.16
HDAC3-211ENST00000491581 NELFAQ9H3P2 528 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms