RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 RNF130Q86XS8 419 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 C1orf162Q8NEQ5 155 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 PROX1Q92786 737 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 CCDC115Q96NT0 180 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 SORCS2Q96PQ0 1159 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 SLC35A5Q9BS91 424 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 SOX7Q9BT81 388 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 RSPO3Q9BXY4 272 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 DPY30Q9C005 99 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 SLC6A13Q9NSD5 602 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 HAO1Q9UJM8 370 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 POU2F3Q9UKI9 436 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 SPIN1Q9Y657 262 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 ATP23Q9Y6H3 246 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 IGHV1-18A0A0C4DH31 117 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 WDR91A4D1P6 747 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 LIPT2A6NK58 231 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 FAAHO00519 579 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 AGR2O95994 175 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 SLC1A3P43003 542 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 POLR2HP52434 150 aaKnown RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 MVDP53602 400 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 ABCE1P61221 599 aaKnown RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 UFM1P61960 85 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 SLC35A1P78382 337 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 EPS8Q12929 822 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 GPAT3Q53EU6 434 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 HIKESHIQ53FT3 197 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 ATAD3BQ5T9A4 648 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 CYB5R2Q6BCY4 276 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 NUDCD3Q8IVD9 361 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 C17orf78Q8N4C9 275 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 AENQ8WTP8 325 aaKnown RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 ZHX1-C8orf76Q96EF9 292 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 TRNT1Q96Q11 434 aaKnown RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 ROPN1BQ9BZX4 212 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 SEC61A2Q9H9S3 476 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 ROPN1Q9HAT0 212 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 RLIMQ9NVW2 624 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-207ENST00000490609 BTNL2Q9UIR0 455 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 PCDHGB4Q9UN71 923 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 MOKQ9UQ07 419 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 SLC9A8Q9Y2E8 581 aa13.56□□□□□ -0.24
COL2A1-207ENST00000490609 KLF11O14901 512 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 EIF1BO60739 113 aaKnown RBP13.55□□□□□ -0.24
COL2A1-207ENST00000490609 AKR7A3O95154 331 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
COL2A1-207ENST00000490609 MPGP29372 298 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 KHKP50053 298 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 LSM11P83369 360 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL2A1-207ENST00000490609 BNIP2Q12982 314 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 CEACAM7Q14002 265 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 CHI3L2Q15782 390 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 FAM174BQ3ZCQ3 159 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 ANXA8L1Q5VT79 327 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 LRRC74BQ6ZQY2 392 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 IL17RELQ6ZVW7 336 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 OR9K2Q8NGE7 335 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 MSI2Q96DH6 328 aaKnown RBP13.55□□□□□ -0.24
COL2A1-207ENST00000490609 TMEM109Q9BVC6 243 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 BEX2Q9BXY8 128 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 PNPOQ9NVS9 261 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 AMDHD2Q9Y303 409 aa13.55□□□□□ -0.24
COL2A1-207ENST00000490609 PKD1L1Q8TDX9 2849 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 IGHV4-61A0A0C4DH41 118 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 AQP7P3A6NL99 342 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 LMX1BO60663 402 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 NPIPB7O75200 414 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 SERPINE1P05121 402 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 IGFBP1P08833 259 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 GKN3PP0CG01 181 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 PRG2P13727 222 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 THBS2P35442 1172 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 NR4A2P43354 598 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 HTR3AP46098 478 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 NME5P56597 212 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 OTUD3Q5T2D3 398 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 MYPOPQ86VE0 399 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 EPHX4Q8IUS5 362 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 CMIPQ8IY22 773 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 FBXO17Q96EF6 278 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 FOXN4Q96NZ1 517 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 NUF2Q9BZD4 464 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 MEAF6Q9HAF1 191 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 PARPBPQ9NWS1 579 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 UPB1Q9UBR1 384 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-207ENST00000490609 RAP2CQ9Y3L5 183 aa13.54□□□□□ -0.24
COL2A1-207ENST00000490609 CDHR4A6H8M9 788 aa13.53□□□□□ -0.24
COL2A1-207ENST00000490609 CCDC154A6NI56 674 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms