RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 KLHL14Q9P2G3 628 aa16.05■□□□□ 0.16
COL9A3-214ENST00000490398 CORO2BQ9UQ03 480 aa16.05■□□□□ 0.16
COL9A3-214ENST00000490398 A0A1B0GWA3 101 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 DNPH1O43598 174 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 FKBP2P26885 142 aaKnown RBP16.04■□□□□ 0.16
COL9A3-214ENST00000490398 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-214ENST00000490398 IDUAP35475 653 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 P2RY4P51582 365 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 CRYBA2P53672 197 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 SLC16A1P53985 500 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 FOXG1P55316 489 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-214ENST00000490398 SLC35A1P78382 337 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 EGR4Q05215 589 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 PDK3Q15120 406 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 TRMT5Q32P41 509 aaKnown RBP16.04■□□□□ 0.16
COL9A3-214ENST00000490398 SFRP5Q5T4F7 317 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 ALKBH2Q6NS38 261 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 PAMR1Q6UXH9 720 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 GALNT5Q7Z7M9 940 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 WFDC8Q8IUA0 241 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 P3H2Q8IVL5 708 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 OR4D11Q8NGI4 311 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 ZHX1-C8orf76Q96EF9 292 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 TACO1Q9BSH4 297 aaKnown RBP16.04■□□□□ 0.16
COL9A3-214ENST00000490398 PTDSS2Q9BVG9 487 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 POTEKPQ9BYX7 375 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 ZNF226Q9NYT6 803 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 GPR52Q9Y2T5 361 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 PRR14LQ5THK1 2151 aa16.04■□□□□ 0.16
COL9A3-214ENST00000490398 IGKV1D-42A0A075B6H8 117 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 A8MVM7 634 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 M0QX08 132 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ATP8B1O43520 1251 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 LYZL6O75951 148 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ATE1O95260 518 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 PTNP21246 168 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ART1P52961 327 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 DUSP7Q16829 419 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 C1orf140Q5VVS0 124 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 KRT73Q86Y46 540 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 RBM45Q8IUH3 476 aaKnown RBP16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ARMC8Q8IUR7 673 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 POU5F2Q8N7G0 328 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ZIC4Q8N9L1 334 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 C11orf65Q8NCR3 313 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 PIGXQ8TBF5 258 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 SLC35B4Q969S0 331 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 LRRC58Q96CX6 371 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 KTI12Q96EK9 354 aaPredicted RBP16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 GMPR2Q9P2T1 348 aaKnown RBP16.03■□□□□ 0.16
COL9A3-214ENST00000490398 SEC14L4Q9UDX3 406 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 ANGPT4Q9Y264 503 aa16.03■□□□□ 0.16
COL9A3-214ENST00000490398 NOSIPQ9Y314 301 aaKnown RBP16.03■□□□□ 0.16
COL9A3-214ENST00000490398 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-214ENST00000490398 FTCDNL1E5RQL4 147 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 M0R3H8 397 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 MRASO14807 208 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 PLAUP00749 431 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 IGHV1-2P23083 117 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 MAP2K6P52564 334 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 SEC24CP53992 1094 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 RBBP4Q09028 425 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 SLC17A1Q14916 467 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 NPTX1Q15818 432 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 OTUD3Q5T2D3 398 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-214ENST00000490398 SEZ6L2Q6UXD5 910 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 Q6ZT83 130 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 TSPYL5Q86VY4 417 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-214ENST00000490398 CALHM3Q86XJ0 350 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 ZNF100Q8IYN0 542 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 OR52E4Q8NGH9 312 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 TAMM41Q96BW9 452 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 ZNF607Q96SK3 696 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 NAA11Q9BSU3 229 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-214ENST00000490398 SPATA5L1Q9BVQ7 753 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 ADPRHL2Q9NX46 363 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 FLVCR1Q9Y5Y0 555 aa16.02■□□□□ 0.16
COL9A3-214ENST00000490398 EIF1BO60739 113 aaKnown RBP16.01■□□□□ 0.15
COL9A3-214ENST00000490398 GOSR1O95249 250 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 CD247P20963 164 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 GYS2P54840 703 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 RGS8P57771 180 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-214ENST00000490398 ITGADQ13349 1161 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 OR1Q1Q15612 314 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 TAB1Q15750 504 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 PAQR6Q6TCH4 344 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 C6orf89Q6UWU4 347 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 BHLHA15Q7RTS1 189 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-214ENST00000490398 KDM8Q8N371 416 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 LSMEM1Q8N8F7 131 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 STEAP2Q8NFT2 490 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 STK35Q8TDR2 534 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 ZNF385AQ96PM9 386 aaKnown RBP16.01■□□□□ 0.15
COL9A3-214ENST00000490398 ARHGDIGQ99819 225 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 EMC3Q9P0I2 261 aa16.01■□□□□ 0.15
COL9A3-214ENST00000490398 AQP7P3A6NL99 342 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 SERPINB7O75635 380 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 LGI1O95970 557 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 GPIP06744 558 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms