RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 H3BNX3 289 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 H3BQ06 376 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 H3BSA7 217 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RNF13O43567 381 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DUX1O43812 170 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CIAO1O76071 339 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MYO1DO94832 1006 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PLEKHA8P1O95397 391 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CTDNEP1O95476 244 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TSHBP01222 138 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PCCAP05165 728 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CELA2AP08217 269 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PNMTP11086 282 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ERFP50548 548 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PLTPP55058 493 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 EEF1A1P68104 462 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SMARCB1Q12824 385 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CDH17Q12864 832 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CALCOCO2Q13137 446 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DNAL1Q4LDG9 190 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 EEF1A1P5Q5VTE0 462 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 OGFOD2Q6N063 350 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CES5AQ6NT32 575 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 WDR59Q6PJI9 974 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SLC25A47Q6Q0C1 308 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ARCQ7LC44 396 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MRPL21Q7Z2W9 205 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 AKAP14Q86UN6 197 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RALGPS2Q86X27 583 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF740Q8NDX6 193 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CD101Q93033 1021 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SCMH1Q96GD3 660 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF486Q96H40 463 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DUX5Q96PT3 197 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM109Q9BVC6 243 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RBM38Q9H0Z9 239 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ADNPQ9H2P0 1102 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RGCCQ9H4X1 137 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ALG9Q9H6U8 611 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 GEMIN7Q9H840 131 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 MRPL40Q9NQ50 206 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DIABLOQ9NR28 239 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM181Q9P2C4 612 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RWDD2AQ9UIY3 292 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF229Q9UJW7 825 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 POU2F3Q9UKI9 436 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TBC1D24Q9ULP9 559 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 STUB1Q9UNE7 303 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RUVBL2Q9Y230 463 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 EXOSC1Q9Y3B2 195 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 NPTNQ9Y639 398 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SPIN1Q9Y657 262 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 A0A087WZ39 114 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 A0A0D9SFI3 127 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ARHGEF35A5YM69 484 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 METTL21EPA6NDL7 271 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 OTOL1A6NHN0 477 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF724A8MTY0 619 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CLOCKO15516 846 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 EMC8O43402 210 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 UGT1A9O60656 530 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 OR5F1O95221 314 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ECDO95905 644 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 HLA-DRAP01903 254 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SBK2P0C263 348 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TFPIP10646 304 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 AZGP1P25311 298 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 FDFT1P37268 417 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 HAAOP46952 286 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 HSPA13P48723 471 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CARD18P57730 90 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RAB11AP62491 216 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SCRN3Q0VDG4 424 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SLC10A2Q12908 348 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DLG1Q12959 904 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ATXN7L3Q14CW9 347 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 VAMP3Q15836 100 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RAB11BQ15907 218 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 LIPKQ5VXJ0 399 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 UGT2A3Q6UWM9 527 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF600Q6ZNG1 722 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 IDO2Q6ZQW0 420 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 LINC00336Q6ZUF6 198 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 STOX1Q6ZVD7 989 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 NOTCH2NLQ7Z3S9 236 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SLC26A11Q86WA9 606 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 BBS1Q8NFJ9 593 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 GRPEL2Q8TAA5 225 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 SMAP2Q8WU79 429 aaPredicted RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM174Q8WUU8 243 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 RNF138Q8WVD3 245 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 TMA16Q96EY4 203 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PAGE5Q96GU1 130 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CPB2Q96IY4 423 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 CNBD2Q96M20 576 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PAPOLGQ9BWT3 736 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF696Q9H7X3 374 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 DDX31Q9H8H2 851 aaKnown RBP2.5□□□□□ -2.01
UBXN4-208ENST00000490163 PELI2Q9HAT8 420 aa2.5□□□□□ -2.01
UBXN4-208ENST00000490163 UGT1A7Q9HAW7 530 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms