RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SDR39U1Q9NRG7 319 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TAS2R16Q9NYV7 291 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ADAM21Q9UKJ8 722 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ALPK2Q86TB3 2170 aa17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 HEATR1Q9H583 2144 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MXRA5Q9NR99 2828 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 E7EQL1 145 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 EIF1BO60739 113 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 KRT75O95678 551 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 IDO1P14902 403 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 IDUAP35475 653 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ANXA11P50995 505 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MAP2K6P52564 334 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CDH11P55287 796 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MAGOHP61326 146 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ETFDHQ16134 617 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 C11orf71Q6IPW1 123 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CLIP4Q8N3C7 705 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC38A5Q8WUX1 472 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GTPBP3Q969Y2 492 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 AURKBQ96GD4 344 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZBTB18Q99592 522 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 RSPO3Q9BXY4 272 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 REG4Q9BYZ8 158 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MANSC1Q9H8J5 431 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC7A10Q9NS82 523 aa17.05■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ABCA1O95477 2261 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SVEP1Q4LDE5 3571 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CIB4A0PJX0 185 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 LIPT2A6NK58 231 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CCT8L1PA6NM43 557 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLCO1B7G3V0H7 640 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PRG2P13727 222 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CD40P25942 277 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZNF83P51522 516 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 P2RY4P51582 365 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC25A3Q00325 362 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 VEZF1Q14119 521 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GSTA3Q16772 222 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TSPO2Q5TGU0 170 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ATG16L1Q676U5 607 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 NXNQ6DKJ4 435 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PAQR6Q6TCH4 344 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 B3GLCTQ6Y288 498 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PEX5LQ8IYB4 626 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TMEM99Q8N816 258 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OR9I1Q8NGQ6 314 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OR52P1PQ8NH57 321 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TPT1P8Q9HAU6 139 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZIM2Q9NZV7 527 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 B3GALT5Q9Y2C3 310 aa17.04■□□□□ 0.32
TNFRSF1B-202ENST00000489921 YLPM1P49750 1951 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 HOXB9P17482 250 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 BNIP2Q12982 314 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CEACAM7Q14002 265 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GNA13Q14344 377 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 RPS26P11Q5JNZ5 115 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OR7E24Q6IFN5 339 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TMEM108Q6UXF1 575 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CASP12Q6UXS9 341 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZNF440Q8IYI8 595 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TMEM45BQ96B21 275 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 RADILQ96JH8 1075 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZNF385AQ96PM9 386 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 NAA11Q9BSU3 229 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 C1QTNF6Q9BXI9 259 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TMBIM4Q9HC24 238 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PARPBPQ9NWS1 579 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 P2RX2Q9UBL9 471 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 DCTN4Q9UJW0 460 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ZNF443Q9Y2A4 671 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC9A8Q9Y2E8 581 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 ATRQ13535 2644 aa17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CHD3Q12873 2000 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1B-202ENST00000489921 COL6A5A8TX70 2615 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 NPIPB7O75200 414 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 AKR7A3O95154 331 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 BCHEP06276 602 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PTAFRP25105 342 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TTKP33981 857 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 CRATP43155 626 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 POLR2JP52435 117 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 DSTNP60981 165 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 IRX1P78414 480 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 LIN52Q52LA3 116 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 OTUD3Q5T2D3 398 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MSANTD1Q6ZTZ1 278 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PIAS4Q8N2W9 510 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 GTF2H4Q92759 462 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 TMEM19Q96HH6 336 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MDFIQ99750 246 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 SLC17A5Q9NRA2 495 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PRDM4Q9UKN5 801 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 MGAT4BQ9UQ53 548 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 PCDHB14Q9Y5E9 798 aa17.02■□□□□ 0.32
TNFRSF1B-202ENST00000489921 AQP7P3A6NL99 342 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 KLF11O14901 512 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 UBDO15205 165 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms