RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 HCN1O60741 890 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 NPIPB7O75200 414 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SNNO75324 88 aaPredicted RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 ECI2O75521 394 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SLITRK3O94933 977 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 GNA14O95837 355 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 LALBAP00709 142 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 IGHG4P01861 327 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 IGHV4-34P06331 123 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 RCC1P18754 421 aaPredicted RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MAGP20916 626 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 CALB2P22676 271 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 LAP3P28838 519 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 PBLDP30039 288 aaPredicted RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 NTSP30990 170 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 LEPP41159 167 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 BTDP43251 543 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SUCLG1P53597 346 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SPIBQ01892 262 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SLC10A7Q0GE19 358 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 C1orf61Q13536 156 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MOBPQ13875 183 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MESDQ14696 234 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 CFAP221Q4G0U5 840 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 TP53I3Q53FA7 332 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 ATAD3BQ5T9A4 648 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 KCNIP4Q6PIL6 250 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SYT10Q6XYQ8 523 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 ZNF679Q8IYX0 411 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 TMEM123Q8N131 208 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 ZCCHC7Q8N3Z6 543 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MDS2Q8NDY4 140 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 OR4D9Q8NGE8 314 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 OR4D5Q8NGN0 318 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 TRMT10AQ8TBZ6 339 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SHC3Q92529 594 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 PIGCQ92535 297 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 EMG1Q92979 244 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MS4A14Q96JA4 679 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 TGM7Q96PF1 710 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 CCNL2Q96S94 520 aaPredicted RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SECISBP2Q96T21 854 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MYCBPQ99417 103 aaPredicted RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 KLHDC3Q9BQ90 382 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SMYD3Q9H7B4 428 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 NUDT15Q9NV35 164 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 SMOXQ9NWM0 555 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 IL36GQ9NZH8 169 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 PHF11Q9UIL8 331 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 PTBP2Q9UKA9 531 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 CLEC4AQ9UMR7 237 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 RPH3ALQ9UNE2 315 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 RABL2BQ9UNT1 228 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MRPS7Q9Y2R9 242 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MEMO1Q9Y316 297 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 PLLPQ9Y342 182 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 AK6Q9Y3D8 172 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 DDX49Q9Y6V7 483 aaKnown RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 KIF16BQ96L93 1317 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 LRP5LA4QPB2 252 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 TRIM64CA6NLI5 447 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 TMEM110-MUSTN1A8MSY1 372 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 KIF2AO00139 706 aaPredicted RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 MPHOSPH10O00566 681 aaKnown RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 ARPC3O15145 178 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 ZNF264O43296 627 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 HCRTR1O43613 425 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 OR10H3O60404 316 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 RHOBTB1O94844 696 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 LRATO95237 230 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 IL1BP01584 269 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 RNH1P13489 461 aaKnown RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 NCK1P16333 377 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 FGF9P31371 208 aaPredicted RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 PRPHP41219 470 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 DAP3P51398 398 aaKnown RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 PLK1P53350 603 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 HERVK_113P61574 105 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 RPS14P62263 151 aaKnown RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 MAP2K1Q02750 393 aaPredicted RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 CHRNB3Q05901 458 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 CEP55Q53EZ4 464 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 CFAP157Q5JU67 520 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 BEND3Q5T5X7 828 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 TPGS2Q68CL5 300 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 TMEM225Q6GV28 225 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 CCDC137Q6PK04 289 aaKnown RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 WDR74Q6RFH5 385 aaPredicted RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 UNQ9370/PRO34162Q6UXP9 181 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 TMEM110Q86TL2 294 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 VSTM4Q8IW00 320 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 NRMQ8IXM6 262 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 TMEM61Q8N0U2 210 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 CLEC4FQ8N1N0 589 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 OR2L13Q8N349 312 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 OR2AP1Q8NGE2 309 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 OR56B4Q8NH76 319 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 DEDD2Q8WXF8 326 aa1.57□□□□□ -2.16
CPSF3-205ENST00000489629 CHCHD10Q8WYQ3 142 aaPredicted RBP1.57□□□□□ -2.16
CPSF3-205ENST00000489629 OR1E3Q8WZA6 343 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms