RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PIGXQ8TBF5 258 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 LRRC8CQ8TDW0 803 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 DYDC1Q8WWB3 177 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 OIT3Q8WWZ8 545 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 SLC35A5Q9BS91 424 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 INPP5KQ9BT40 448 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 VIPAS39Q9H9C1 493 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 BARX1Q9HBU1 254 aaPredicted RBP10.3□□□□□ -0.76
ACTN4-206ENST00000489451 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 ASB6Q9NWX5 421 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 EMC3Q9P0I2 261 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 FLVCR1Q9Y5Y0 555 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 MALRD1Q5VYJ5 2156 aa10.3□□□□□ -0.76
ACTN4-206ENST00000489451 TMED7-TICAM2A0A0A6YYA0 188 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 CIB4A0PJX0 185 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 FAM234BA2RU67 622 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 AGAP5A6NIR3 686 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 HMGB1P1B2RPK0 211 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-206ENST00000489451 E9PBE3 544 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 M0R1B8 84 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 SDHDO14521 159 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 PHF1O43189 567 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-206ENST00000489451 DNPH1O43598 174 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 AGR2O95994 175 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 IDO1P14902 403 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 EPHA3P29320 983 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 KHKP50053 298 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 P2RY4P51582 365 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 NUDT6P53370 316 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 MVDP53602 400 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 OR2B6P58173 313 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 UFM1P61960 85 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 SLC17A1Q14916 467 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 NRF1Q16656 503 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 FAM174BQ3ZCQ3 159 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 GPAT3Q53EU6 434 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 ATAD3BQ5T9A4 648 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 SLC22A25Q6T423 547 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 RNF130Q86XS8 419 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 UBE2J2Q8N2K1 259 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 MUC15Q8N387 334 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 TRIML2Q8N7C3 387 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 GLB1L3Q8NCI6 653 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-206ENST00000489451 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 RADILQ96JH8 1075 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 CCDC115Q96NT0 180 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 ZNF385AQ96PM9 386 aaKnown RBP10.29□□□□□ -0.76
ACTN4-206ENST00000489451 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-206ENST00000489451 SLC17A5Q9NRA2 495 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.29□□□□□ -0.76
ACTN4-206ENST00000489451 SLC6A13Q9NSD5 602 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 FAIMQ9NVQ4 179 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 TMEM181Q9P2C4 612 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 TRAPPC4Q9Y296 219 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 TMED7Q9Y3B3 224 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 CHST2Q9Y4C5 530 aa10.29□□□□□ -0.76
ACTN4-206ENST00000489451 CCT8L1PA6NM43 557 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 A8MV72 311 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 H7C417 338 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 ZNF208O43345 1280 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 SPRY1O43609 319 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 MRPL33O75394 65 aaKnown RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 TP53P04637 393 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 TACR3P29371 465 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 CHI3L1P36222 383 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 CLK1P49759 484 aaKnown RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 ANXA11P50995 505 aaKnown RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 NME5P56597 212 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 VLDLRP98155 873 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 LGALS3BPQ08380 585 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 EPS8Q12929 822 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 GSTA3Q16772 222 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 CASP12Q6UXS9 341 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 LINGO2Q7L985 606 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 SSX8Q7RTT4 187 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 ARFGAP2Q8N6H7 521 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 C10orf105Q8TEF2 133 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 TRNT1Q96Q11 434 aaKnown RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 TNFRSF13CQ96RJ3 184 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 RHNO1Q9BSD3 238 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 ADAM19Q9H013 955 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 AIG1Q9NVV5 245 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 RLIMQ9NVW2 624 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 BTNL2Q9UIR0 455 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 MGAT4BQ9UQ53 548 aa10.28□□□□□ -0.76
ACTN4-206ENST00000489451 SPIN1Q9Y657 262 aaPredicted RBP10.28□□□□□ -0.76
ACTN4-206ENST00000489451 ATP6V1G2-DDX39BF2Z307 99 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 FAAHO00519 579 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 GPR171O14626 319 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 UBDO15205 165 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 SLC22A3O75751 556 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 TGDSO95455 350 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 IL6P05231 212 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 PGRP06401 933 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 IGHV4-31P0DP07 118 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 ACAA2P42765 397 aaKnown RBP10.27□□□□□ -0.77
ACTN4-206ENST00000489451 MAGEA8P43361 318 aa10.27□□□□□ -0.77
ACTN4-206ENST00000489451 FABP6P51161 128 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms