RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 FAM174BQ3ZCQ3 159 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 RNF130Q86XS8 419 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 CMIPQ8IY22 773 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 ANKFN1Q8N957 763 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 WDR60Q8WVS4 1066 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 PMM1Q92871 262 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 TEX37Q96LM6 180 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 SORT1Q99523 831 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 NAA11Q9BSU3 229 aaPredicted RBP10.85□□□□□ -0.67
CPSF3-204ENST00000489403 FKRPQ9H9S5 495 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 RAP2CQ9Y3L5 183 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
CPSF3-204ENST00000489403 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 ATP6V1G2-DDX39BF2Z307 99 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 FAAHO00519 579 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 CSF3P09919 207 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 MYZAPP0CAP1 466 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 LBPP18428 481 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 MPGP29372 298 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 APOBEC3AP31941 199 aaPredicted RBP10.84□□□□□ -0.67
CPSF3-204ENST00000489403 CDKN2CP42773 168 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 EFNA4P52798 201 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 CLNS1AP54105 237 aaKnown RBP10.84□□□□□ -0.67
CPSF3-204ENST00000489403 EPS8Q12929 822 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 OTUD3Q5T2D3 398 aaPredicted RBP10.84□□□□□ -0.67
CPSF3-204ENST00000489403 MRPL2Q5T653 305 aaKnown RBP10.84□□□□□ -0.67
CPSF3-204ENST00000489403 PAQR6Q6TCH4 344 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 PROX1Q92786 737 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 TMEM45BQ96B21 275 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 CCDC115Q96NT0 180 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 TRNT1Q96Q11 434 aaKnown RBP10.84□□□□□ -0.67
CPSF3-204ENST00000489403 NUF2Q9BZD4 464 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 PARPBPQ9NWS1 579 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 BTNL2Q9UIR0 455 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 MOKQ9UQ07 419 aa10.84□□□□□ -0.67
CPSF3-204ENST00000489403 ARFGEF3Q5TH69 2177 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 AKR7A3O95154 331 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 F12P00748 615 aaPredicted RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 ALDOCP09972 364 aaKnown RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 BMP4P12644 408 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 USF1P22415 310 aaPredicted RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 IL12AP29459 219 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 S100A3P33764 101 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 SLC1A3P43003 542 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 SLC1A6P48664 564 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 RPL14P50914 215 aaKnown RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 NME5P56597 212 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 PRPS1P60891 318 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 CHRNB3Q05901 458 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 CEACAM7Q14002 265 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 SWI5Q1ZZU3 235 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 MST1LQ2TV78 715 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 COX20Q5RI15 118 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 CYB5R2Q6BCY4 276 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 LRRC74BQ6ZQY2 392 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 LRRC34Q8IZ02 419 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 ARIH2OSQ8N7S6 290 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 TMEM99Q8N816 258 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 ZIC4Q8N9L1 334 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 OR9K2Q8NGE7 335 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 AENQ8WTP8 325 aaKnown RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 ZNF385AQ96PM9 386 aaKnown RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 SORCS2Q96PQ0 1159 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 PANX1Q96RD7 426 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 BEX2Q9BXY8 128 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 ADAM19Q9H013 955 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 MEAF6Q9HAF1 191 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 HAO1Q9UJM8 370 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.83□□□□□ -0.68
CPSF3-204ENST00000489403 PMF1-BGLAPU3KQ54 211 aa10.83□□□□□ -0.68
CPSF3-204ENST00000489403 IGHV1-18A0A0C4DH31 117 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 CFAP73A6NFT4 308 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 LIPT2A6NK58 231 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 AQP7P3A6NL99 342 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 VWC2LB2RUY7 222 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 KLF11O14901 512 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 BIRC5O15392 142 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 WNT11O96014 354 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 GPIP06744 558 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 IL7RP16871 459 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 CDH2P19022 906 aaPredicted RBP10.82□□□□□ -0.68
CPSF3-204ENST00000489403 P2RY4P51582 365 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 MAP2K6P52564 334 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 UFM1P61960 85 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
CPSF3-204ENST00000489403 TXNL4AP83876 142 aaKnown RBP10.82□□□□□ -0.68
CPSF3-204ENST00000489403 OR7A5Q15622 319 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 MAPK11Q15759 364 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 KRTAP24-1Q3LI83 254 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 HIKESHIQ53FT3 197 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 OGFOD2Q6N063 350 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 KLHL24Q6TFL4 600 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 AAED1Q7RTV5 226 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 TRIML2Q8N7C3 387 aa10.82□□□□□ -0.68
CPSF3-204ENST00000489403 POMGNT2Q8NAT1 580 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms