RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CASP12Q6UXS9 341 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 P2RY8Q86VZ1 359 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 MUCL1Q96DR8 90 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 COX4I2Q96KJ9 171 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 SPATA9Q9BWV2 254 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 RAD21L1Q9H4I0 556 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 CACYBPQ9HB71 228 aaKnown RBP20.29■□□□□ 0.84
COL9A3-213ENST00000489045 ZNF701Q9NV72 531 aaPredicted RBP20.29■□□□□ 0.84
COL9A3-213ENST00000489045 MALT1Q9UDY8 824 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 ZNF232Q9UNY5 417 aa20.29■□□□□ 0.84
COL9A3-213ENST00000489045 A0A096LPI6 279 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 TRIM64A6NGJ6 449 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 TRIM64BA6NI03 449 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 PRG2P13727 222 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 COPZ1P61923 177 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 FAPQ12884 760 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 FADDQ13158 208 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 ZSWIM7Q19AV6 140 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 ZNF672Q499Z4 452 aaPredicted RBP20.28■□□□□ 0.84
COL9A3-213ENST00000489045 PAQR6Q6TCH4 344 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 CLEC9AQ6UXN8 241 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 FUNDC1Q8IVP5 155 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 GOLGA6L1Q8N7Z2 621 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 DYDC1Q8WWB3 177 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 MAL2Q969L2 176 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 CCDC28BQ9BUN5 200 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 BDH2Q9BUT1 245 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 A4GALTQ9NPC4 353 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 ASB6Q9NWX5 421 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 NPAP1Q9NZP6 1156 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 PRDM4Q9UKN5 801 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 SLC9A8Q9Y2E8 581 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 IFT52Q9Y366 437 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 FLVCR1Q9Y5Y0 555 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 NAV3Q8IVL0 2385 aa20.28■□□□□ 0.84
COL9A3-213ENST00000489045 ZANQ9Y493 2812 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 CIB4A0PJX0 185 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 CCT8L1PA6NM43 557 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 NR5A2O00482 541 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 BMP2P12643 396 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 NCF2P19878 526 aaPredicted RBP20.27■□□□□ 0.84
COL9A3-213ENST00000489045 AQP5P55064 265 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 RPS4XP62701 263 aaKnown RBP20.27■□□□□ 0.84
COL9A3-213ENST00000489045 BNIP2Q12982 314 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 CEACAM7Q14002 265 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 SLC17A1Q14916 467 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 OR7A5Q15622 319 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 ZNF311Q5JNZ3 666 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 OTUD3Q5T2D3 398 aaPredicted RBP20.27■□□□□ 0.84
COL9A3-213ENST00000489045 BLOC1S3Q6QNY0 202 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 SSX8Q7RTT4 187 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 SERPINA11Q86U17 422 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 ARMC7Q9H6L4 198 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 TAS2R16Q9NYV7 291 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 SLC25A37Q9NYZ2 338 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 CCDC167Q9P0B6 97 aa20.27■□□□□ 0.84
COL9A3-213ENST00000489045 LIPT2A6NK58 231 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 AKR7A3O95154 331 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 GPIP06744 558 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 SOD3P08294 240 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 DANCRP0C864 163 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 FOXG1P55316 489 aaPredicted RBP20.26■□□□□ 0.83
COL9A3-213ENST00000489045 ATP5J2P56134 94 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 LTBQ06643 244 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 KRTAP21-3Q3LHN1 58 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 LRIF1Q5T3J3 769 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 PRAMEF8Q5VWM4 474 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 PRAMEF7Q5VXH5 474 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 MSRB3Q8IXL7 192 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 TMEM99Q8N816 258 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 OR52E4Q8NGH9 312 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 BBS10Q8TAM1 723 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 SMAP2Q8WU79 429 aaPredicted RBP20.26■□□□□ 0.83
COL9A3-213ENST00000489045 SPDL1Q96EA4 605 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 TRIM2Q9C040 744 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 BCL2L10Q9HD36 194 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 PARPBPQ9NWS1 579 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 SLAMF8Q9P0V8 285 aa20.26■□□□□ 0.83
COL9A3-213ENST00000489045 TLN2Q9Y4G6 2542 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 PLCE1Q9P212 2302 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 C5orf58C9J3I9 102 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 SMAD7O15105 426 aaKnown RBP20.25■□□□□ 0.83
COL9A3-213ENST00000489045 FRS3O43559 492 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 ITGA5P08648 1049 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 OR52N5Q8NH56 324 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 C3orf49Q96BT1 292 aa20.25■□□□□ 0.83
COL9A3-213ENST00000489045 A0A1W2PP18 115 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 A0A1W2PR80 420 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 AQP7P3A6NL99 342 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 A8MVM7 634 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 FAM171A2A8MVW0 826 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 SHISA9B4DS77 424 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 ABCD4O14678 606 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 HEXAP06865 529 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 GABRA6Q16445 453 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 PAGE3Q5JUK9 113 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 C9orf135Q5VTT2 229 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 OR9K2Q8NGE7 335 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 TAPBPLQ9BX59 468 aa20.24■□□□□ 0.83
COL9A3-213ENST00000489045 SLC52A3Q9NQ40 469 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms