RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ABLIM2Q6H8Q1 611 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 ERICH5Q6P6B1 374 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 PAQR6Q6TCH4 344 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 STAC2Q6ZMT1 411 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 SPATA21Q7Z572 469 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 NET1Q7Z628 596 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-218ENST00000489037 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 RASSF5Q8WWW0 418 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 ZNF300Q96RE9 604 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-218ENST00000489037 ELAC2Q9BQ52 826 aaKnown RBP12.69□□□□□ -0.38
BRCA1-218ENST00000489037 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
BRCA1-218ENST00000489037 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 PIF1Q9H611 641 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 C12orf10Q9HB07 376 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 AP3M1Q9Y2T2 418 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
BRCA1-218ENST00000489037 MYO9AB2RTY4 2548 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 IGKV3D-15A0A087WSY6 115 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 LIPT2A6NK58 231 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 TPST1O60507 370 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 MRPL33O75394 65 aaKnown RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ADAP00813 363 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 C8BP07358 591 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 PSMB1P20618 241 aaKnown RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 CRYGSP22914 178 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 PCGF2P35227 344 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 PCBP3P57721 371 aaKnown RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 POU4F3Q15319 338 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 VMACQ2NL98 169 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ALG10BQ5I7T1 473 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 OTUD3Q5T2D3 398 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 C1orf140Q5VVS0 124 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ULK3Q6PHR2 472 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ATG4DQ86TL0 474 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 CCDC103Q8IW40 242 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 UBE2J2Q8N2K1 259 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 LSMEM1Q8N8F7 131 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 SMYD1Q8NB12 490 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 KISS1RQ969F8 398 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 APH1AQ96BI3 265 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 SLC47A1Q96FL8 570 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ADPRHL2Q9NX46 363 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
BRCA1-218ENST00000489037 ING1Q9UK53 422 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-218ENST00000489037 LRBAP50851 2863 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 A0A1B0GWA3 101 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 OR2T1O43869 369 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 VAMP5O95183 116 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 IFNA14P01570 189 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 HRGP04196 525 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 KLK2P20151 261 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 DNASE1P24855 282 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 CCKARP32238 428 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 SLC16A1P53985 500 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 H3F3AP84243 136 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 DMTNQ08495 405 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 ITGADQ13349 1161 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 GLIPR1L2Q4G1C9 344 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 RABL3Q5HYI8 236 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 SFRP5Q5T4F7 317 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 FAM91A1Q658Y4 838 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 Q6ZT83 130 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 GABRG1Q8N1C3 465 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 SLC38A4Q969I6 547 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 SLC25A36Q96CQ1 311 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 RCN3Q96D15 328 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 PIK3IP1Q96FE7 263 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 SF3B5Q9BWJ5 86 aaKnown RBP12.67□□□□□ -0.38
BRCA1-218ENST00000489037 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 C6orf203Q9P0P8 240 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-218ENST00000489037 SLC9A8Q9Y2E8 581 aa12.67□□□□□ -0.38
BRCA1-218ENST00000489037 PRR14LQ5THK1 2151 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 ZNF716A6NP11 495 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 TMEM229AB2RXF0 380 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 AKR7A3O95154 331 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 LGI1O95970 557 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 OPN1SWP03999 348 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 COX4I1P13073 169 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 DNAJA1P31689 397 aaKnown RBP12.66□□□□□ -0.38
BRCA1-218ENST00000489037 SEC24CP53992 1094 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 VEZF1Q14119 521 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 OR1Q1Q15612 314 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 C6orf89Q6UWU4 347 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 CASP12Q6UXS9 341 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 CCDC80Q76M96 950 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-218ENST00000489037 GPAT4Q86UL3 456 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 WFDC8Q8IUA0 241 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 TMEM99Q8N816 258 aa12.66□□□□□ -0.38
BRCA1-218ENST00000489037 MFSD8Q8NHS3 518 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms