RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 C2orf42Q9NWW7 574 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 MTRF1LQ9UGC7 380 aaKnown RBP3.39□□□□□ -1.87
PTCD3-216ENST00000487043 CHRNA9Q9UGM1 479 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 ATP6V1HQ9UI12 483 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 PROCRQ9UNN8 238 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 CCL26Q9Y258 94 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 MRPS18CQ9Y3D5 142 aaKnown RBP3.39□□□□□ -1.87
PTCD3-216ENST00000487043 LRP12Q9Y561 859 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 FKBP7Q9Y680 259 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 CHD7Q9P2D1 2997 aa3.39□□□□□ -1.87
PTCD3-216ENST00000487043 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 RANBP2P49792 3224 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 A0A0D9SEW6 157 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 MEIOCA2RUB1 952 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 IFITM10A6NMD0 228 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 E7ESA3 106 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 H3BMH7 237 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 AP3B1O00203 1094 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 EIF3HO15372 352 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ZMPSTE24O75844 475 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 STK17BO94768 372 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PRAMEF12O95522 483 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CD160O95971 181 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 AMBPP02760 352 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ANXA4P09525 319 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 THRBP10828 461 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 MLNP12872 115 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 SELEP16581 610 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 TPSB2P20231 275 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 MAT2AP31153 395 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 FCGR2CP31995 323 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 HSPA9P38646 679 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 SLC1A6P48664 564 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 HERVK_113P63132 956 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ERVK-8P63133 956 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 BASP1P80723 227 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 SARNPP82979 210 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 SLC10A7Q0GE19 358 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PRPSAP1Q14558 356 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CASP8Q14790 479 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CYTH1Q15438 398 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 TPSAB1Q15661 275 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 MLF2Q15773 248 aaPredicted RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ECSCRQ19T08 205 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 FAM182AQ5T1J6 154 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ANKRD22Q5VYY1 191 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 NCR3LG1Q68D85 454 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CES3Q6UWW8 571 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 TPGS1Q6ZTW0 290 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CENPUQ71F23 418 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 TRMT10CQ7L0Y3 403 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 LPCAT2Q7L5N7 544 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 LINC00523Q86TU6 105 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 MFSD6LQ8IWD5 586 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 IQCKQ8N0W5 287 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PDIK1LQ8N165 341 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CENPSQ8N2Z9 138 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ARFGAP2Q8N6H7 521 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 OR52K2Q8NGK3 314 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 OR2T34Q8NGX1 318 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PCNPQ8WW12 178 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ING5Q8WYH8 240 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PNPLA2Q96AD5 504 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PINX1Q96BK5 328 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 IMP4Q96G21 291 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ANKRD27Q96NW4 1050 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 AGAP3Q96P47 875 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PSKH2Q96QS6 385 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 GPA33Q99795 319 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 OVOL2Q9BRP0 275 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 FEM1AQ9BSK4 669 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 WRAP53Q9BUR4 548 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ERVK-6Q9BXR3 956 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 SLC25A51Q9H1U9 297 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 GBA3Q9H227 469 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 KAT8Q9H7Z6 458 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 MED20Q9H944 212 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 WDR76Q9H967 626 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 PDFQ9HBH1 243 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ZFP14Q9HCL3 533 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 NRN1Q9NPD7 142 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF446Q9NWS9 450 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 DUS2Q9NX74 493 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 RDH8Q9NYR8 311 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 EIF3KQ9UBQ5 218 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 RSPH14Q9UHP6 348 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 IKZF3Q9UKT9 509 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 CLEC4EQ9ULY5 219 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 FZR1Q9UM11 496 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 HPCAL4Q9UM19 191 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 SLC9A8Q9Y2E8 581 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 OR51B4Q9Y5P0 310 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 LAMA2P24043 3122 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 HELZP42694 1942 aaKnown RBP3.38□□□□□ -1.87
PTCD3-216ENST00000487043 C2orf16Q68DN1 1984 aa3.38□□□□□ -1.87
PTCD3-216ENST00000487043 NUP210Q8TEM1 1887 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-216ENST00000487043 NYNRINQ9P2P1 1898 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms