RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 VNN3Q9NY84 501 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 SLC6A5Q9Y345 797 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 CSMD2Q7Z408 3487 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 MED13LQ71F56 2210 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 NF1P21359 2839 aa15.35■□□□□ 0.05
VIM-205ENST00000485947 A0A1W2PRQ8 180 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 NKX2-6A6NCS4 301 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 G3V2T6 193 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 H0YJX3 145 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 FAAHO00519 579 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 FFAR1O14842 300 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 TPST2O60704 377 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 ANGPTL1O95841 491 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 UBTFL6P0CB48 400 aaPredicted RBP15.34■□□□□ 0.05
VIM-205ENST00000485947 UQCRBP14927 111 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 SLC6A8P48029 635 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 LIMS1P48059 325 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 TAS2R41P59536 307 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 EPS8Q12929 822 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 SKP2Q13309 424 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 DGCR6Q14129 220 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 CD226Q15762 336 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 GLYR1Q49A26 553 aaPredicted RBP15.34■□□□□ 0.05
VIM-205ENST00000485947 APOOLQ6UXV4 268 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 SEM1Q6ZVN7 128 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 YRDCQ86U90 279 aaKnown RBP15.34■□□□□ 0.05
VIM-205ENST00000485947 LINC00471Q8N535 108 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 FADS6Q8N9I5 356 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 OR4C15Q8NGM1 316 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 TRIM2Q9C040 744 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 NMNAT1Q9HAN9 279 aaPredicted RBP15.34■□□□□ 0.05
VIM-205ENST00000485947 TMEM27Q9HBJ8 222 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 ACER3Q9NUN7 267 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 PPP4R1LQ9P1A2 415 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 CAMK2AQ9UQM7 478 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 AKAP9Q99996 3911 aa15.34■□□□□ 0.05
VIM-205ENST00000485947 IGLV3-32A0A0A0MS00 114 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 TRAPPC13A5PLN9 417 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 ARRDC5A6NEK1 342 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 CPSF4LA6NMK7 179 aaKnown RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 BCAS1O75363 584 aaPredicted RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 HPRP00739 348 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 GKN3PP0CG01 181 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 ZNF26P17031 533 aaPredicted RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 DPP4P27487 766 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 OPRM1P35372 400 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 ACAA2P42765 397 aaKnown RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 IST1P53990 364 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 SUMO3P55854 103 aaPredicted RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 C17orf67Q0P5P2 114 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 PIN1Q13526 163 aaPredicted RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 TRAM2Q15035 370 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 ZNF613Q6PF04 617 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 ADGRE4PQ86SQ3 457 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 MARCH3Q86UD3 253 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 STK32CQ86UX6 486 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 LSMEM1Q8N8F7 131 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 GATSQ8NAP1 163 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 OR4K17Q8NGC6 315 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 ADAMTS16Q8TE57 1224 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 WNT2BQ93097 391 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 TM9SF2Q99805 663 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 RBM4BQ9BQ04 359 aaKnown RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 PSD2Q9BQI7 771 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 RBM4Q9BWF3 364 aaKnown RBP15.33■□□□□ 0.04
VIM-205ENST00000485947 COQ10BQ9H8M1 238 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 DKKL1Q9UK85 242 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 TMCC3Q9ULS5 477 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 U3KQV3 271 aa15.33■□□□□ 0.04
VIM-205ENST00000485947 C2orf72A6NCS6 295 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 SOCS2O14508 198 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 SCO2O43819 266 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 ZIC3O60481 467 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 CYP7B1O75881 506 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 PRG2P13727 222 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 CTSSP25774 331 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 HSPA13P48723 471 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 ASCL1P50553 236 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 RNF144AP50876 292 aaPredicted RBP15.32■□□□□ 0.04
VIM-205ENST00000485947 P2RX1P51575 399 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 ALDH3A2P51648 485 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 COPZ1P61923 177 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 TLE4Q04727 773 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 DAG1Q14118 895 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 OR1Q1Q15612 314 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 MICAQ29983 383 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 EXOC3L2Q2M3D2 409 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 DCST1Q5T197 706 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 TMEM179BQ7Z7N9 219 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 LIX1LQ8IVB5 337 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 CBR4Q8N4T8 237 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 TMCO5AQ8N6Q1 288 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 GIPC3Q8TF64 312 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 SLC41A3Q96GZ6 507 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 SFXN2Q96NB2 322 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 USE1Q9NZ43 259 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 RPS6KB2Q9UBS0 482 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 FBXL2Q9UKC9 423 aa15.32■□□□□ 0.04
VIM-205ENST00000485947 CARD8Q9Y2G2 431 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms