RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MBOAT4Q96T53 435 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 RBM4BQ9BQ04 359 aaKnown RBP3.53□□□□□ -1.84
VPS13A-211ENST00000484581 BPIFA3Q9BQP9 254 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 RBKSQ9H477 322 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 CLSTN2Q9H4D0 955 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 ARMCX1Q9P291 453 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 VANGL2Q9ULK5 521 aa3.53□□□□□ -1.84
VPS13A-211ENST00000484581 KIF26BQ2KJY2 2108 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PHLPP2Q6ZVD8 1323 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 CLSPNQ9HAW4 1339 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SMIM28A0A1B0GU29 152 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 CCT8L1PA6NM43 557 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SHISA9B4DS77 424 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 H7C423 109 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 HSD17B6O14756 317 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 LSM1O15116 133 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PSTPIP1O43586 416 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SH3BGRLO75368 114 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 OR2F2O95006 317 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 VENTXO95231 258 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PIGRP01833 764 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 STSP08842 583 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 ZNF43P17038 809 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 ANXA13P27216 316 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 ADORA2BP29275 332 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 HTR1FP30939 366 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 CALCRP30988 508 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 EPHX2P34913 555 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 VHLP40337 213 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 MAGEA1P43355 309 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 YAP1P46937 504 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PLK1P53350 603 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 GLIPR1L2Q4G1C9 344 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 OR5M10Q6IEU7 315 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 OR52E8Q6IFG1 317 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SLC8B1Q6J4K2 584 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SLC25A48Q6ZT89 311 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SSX9Q7RTT3 188 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 TIPARPQ7Z3E1 657 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 MFSD6LQ8IWD5 586 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 TPRX1Q8N7U7 411 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 ZNF321PQ8N8H1 164 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 OR56B4Q8NH76 319 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PAQR8Q8TEZ7 354 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 RAPGEF5Q92565 580 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 ISG20Q96AZ6 181 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 SEC22AQ96IW7 307 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 RIOK1Q9BRS2 568 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 C20orf24Q9BUV8 137 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 IQCGQ9H095 443 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 DNTTIP1Q9H147 329 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PITPNC1Q9UKF7 332 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 KCNIP3Q9Y2W7 256 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PLLPQ9Y342 182 aa3.52□□□□□ -1.85
VPS13A-211ENST00000484581 RPL36Q9Y3U8 105 aaKnown RBP3.52□□□□□ -1.85
VPS13A-211ENST00000484581 PLEKHG2Q9H7P9 1386 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 MROH5Q6ZUA9 1318 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 TRAV9-2A0A087WT02 112 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 TRAV25A0A0B4J276 109 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 A0A1W2PPR1 153 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OR5B21A6NL26 309 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 A8MX80 341 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 SUPT3HB4E1H0 165 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 GFYI3L273 518 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 CDX4O14627 284 aaPredicted RBP3.51□□□□□ -1.85
VPS13A-211ENST00000484581 ZNF253O75346 499 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OR7A10O76100 309 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 SLITRK3O94933 977 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OXSR1O95747 527 aaPredicted RBP3.51□□□□□ -1.85
VPS13A-211ENST00000484581 P04436 131 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 HOXD4P09016 255 aaPredicted RBP3.51□□□□□ -1.85
VPS13A-211ENST00000484581 CT62P0C5K7 136 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 POLR2MP0CAP2 368 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 HOXD10P28358 340 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 PRDX3P30048 256 aaKnown RBP3.51□□□□□ -1.85
VPS13A-211ENST00000484581 IFNA8P32881 189 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 GCKP35557 465 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 DDOSTP39656 456 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 KIR2DS2P43631 304 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OR1G1P47890 313 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 RPL34P49207 117 aaKnown RBP3.51□□□□□ -1.85
VPS13A-211ENST00000484581 EIF3EP60228 445 aaKnown RBP3.51□□□□□ -1.85
VPS13A-211ENST00000484581 SLC10A7Q0GE19 358 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OR5I1Q13606 314 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OXA1LQ15070 435 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 VPS26BQ4G0F5 336 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 PIP5KL1Q5T9C9 394 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 TMEM220Q6QAJ8 160 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 HSDL2Q6YN16 418 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 MARCH9Q86YJ5 346 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 SKA3Q8IX90 412 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 GPR151Q8TDV0 419 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 P2RY13Q9BPV8 354 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 CHIAQ9BZP6 476 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 MIEF1Q9NQG6 463 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 INPP5EQ9NRR6 644 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 DHRS4-AS1Q9P1J3 65 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 OR1A1Q9P1Q5 309 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 NUP50Q9UKX7 468 aa3.51□□□□□ -1.85
VPS13A-211ENST00000484581 N6AMT1Q9Y5N5 214 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms