RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 THBS1P07996 1170 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 BMP7P18075 431 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 ATF1P18846 271 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 NFYAP23511 347 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 OR1Q1Q15612 314 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 B3GNTL1Q67FW5 361 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 C17orf107Q6ZR85 190 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 SPICQ8N5J4 248 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 CLRN3Q8NCR9 226 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 OR10H4Q8NGA5 316 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 ABHD4Q8TB40 342 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 SERINC2Q96SA4 455 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TMPRSS13Q9BYE2 586 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 ZNF350Q9GZX5 532 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 SRMSQ9H3Y6 488 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 FN3KQ9H479 309 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 SFXN1Q9H9B4 322 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TMEM74BQ9NUR3 256 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 CAMK2AQ9UQM7 478 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 CDH23Q9H251 3354 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3DA0A087WVF3 549 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3IA0A087WXS9 549 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3EA0A087X179 549 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 NPIPA5A0A0B4J1W7 369 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 OR2M5A3KFT3 312 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3LB9A6J9 549 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 NPIPA7E9PJI5 369 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 SUSD5O60279 629 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 SELENOFO60613 162 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3HP0C7X1 549 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 NPIPA8P0DM63 369 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 NAT2P11245 290 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 CPMP14384 443 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TLX1P31314 330 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 HTR4Q13639 388 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 MRPL2Q5T653 305 aaKnown RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3CQ6IPX1 549 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 NUDT18Q6ZVK8 323 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 TBC1D3Q8IZP1 549 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 ZNF619Q8N2I2 560 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 PHOSPHO2Q8TCD6 241 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 ATOH1Q92858 354 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 SCARF2Q96GP6 870 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 ORAI3Q9BRQ5 295 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 OR10A4Q9H209 315 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 ZCCHC4Q9H5U6 513 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 MRPL15Q9P015 296 aaKnown RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 CPNE7Q9UBL6 633 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 GPR160Q9UJ42 338 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 ANXA2P2A6NMY6 339 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 CTDSPLO15194 276 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 PLPP2O43688 288 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 B3GALT2O43825 422 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 PTP4A3O75365 173 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 REM1O75628 298 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 CD53P19397 219 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 SLC3A1Q07837 685 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 GPM6BQ13491 265 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 DCST2Q5T1A1 773 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 OR5M10Q6IEU7 315 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 RD3Q7Z3Z2 195 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 EIF4E3Q8N5X7 224 aaKnown RBP16.63■□□□□ 0.25
SSR4-209ENST00000482902 C17orf47Q8NEP4 570 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 OR1S1Q8NH92 325 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 PIGKQ92643 395 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 FBXO34Q9NWN3 711 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 DAPP1Q9UN19 280 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 NPFFR2Q9Y5X5 522 aa16.63■□□□□ 0.25
SSR4-209ENST00000482902 KIAA0100Q14667 2235 aaKnown RBP16.63■□□□□ 0.25
SSR4-209ENST00000482902 ZNF98A6NK75 572 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 PEX12O00623 359 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 DBIP07108 87 aaKnown RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 RAB3BP20337 219 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 PSMB1P20618 241 aaKnown RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 RAD52P43351 418 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 CCR9P51686 369 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 SLC16A1P53985 500 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 FLI1Q01543 452 aaPredicted RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 USP53Q70EK8 1073 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 IZUMO1Q8IYV9 350 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 RNF113BQ8IZP6 322 aaKnown RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 LNX2Q8N448 690 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 KISS1RQ969F8 398 aaPredicted RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 OR2A5Q96R48 311 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 HRASLSQ9HDD0 168 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 CLDND1Q9NY35 253 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 ZMAT5Q9UDW3 170 aaKnown RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 RCE1Q9Y256 329 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 ZNF860A6NHJ4 632 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 CTSVO60911 334 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 STX11O75558 287 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 SMIM10L1P0DMW3 83 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 SAGP10523 405 aaPredicted RBP16.62■□□□□ 0.25
SSR4-209ENST00000482902 NDUFS1P28331 727 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 ADPRHP54922 357 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 RAP2BP61225 183 aa16.62■□□□□ 0.25
SSR4-209ENST00000482902 FAM69AQ5T7M9 428 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms