RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FGF11Q92914 225 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 UBE2E3Q969T4 207 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 PAGE5Q96GU1 130 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 OXGR1Q96P68 337 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 RNF2Q99496 336 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 PARD6BQ9BYG5 372 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 RAB34Q9BZG1 259 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 SELENOIQ9C0D9 397 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 C20orf85Q9H1P6 137 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 YY1AP1Q9H869 796 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 FOLH1BQ9HBA9 442 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 AIG1Q9NVV5 245 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 BTNL2Q9UIR0 455 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 NEUROG3Q9Y4Z2 214 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 CDH10Q9Y6N8 788 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 V9GY05 133 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 SH3TC1Q8TE82 1336 aa3.83□□□□□ -1.8
SF3B1-210ENST00000482158 RPAP1Q9BWH6 1393 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-210ENST00000482158 PLEKHG1Q9ULL1 1385 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 WI2-2373I1.2A0A1W2PRP0 233 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-210ENST00000482158 NBR2O15453 112 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 MBTPS2O43462 519 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 TRAF3IP2O43734 574 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-210ENST00000482158 ATP5LO75964 103 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 DIRAS1O95057 198 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 OPN1MWP04001 364 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 OPN1MW2P0DN77 364 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 OPN1MW3P0DN78 364 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 ATP6V1B2P21281 511 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 ANXA13P27216 316 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 CD1BP29016 333 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 CTRLP40313 264 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 RPL13AP40429 203 aaKnown RBP3.82□□□□□ -1.8
SF3B1-210ENST00000482158 CCT3P49368 545 aaKnown RBP3.82□□□□□ -1.8
SF3B1-210ENST00000482158 WNT4P56705 351 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 NUP107P57740 925 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 TGFBR3Q03167 851 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 PDZK1Q5T2W1 519 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 CASC1Q6TDU7 716 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 RGS9BPQ6ZS82 235 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 CCDC50Q8IVM0 306 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 ZNF679Q8IYX0 411 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 FTMTQ8N4E7 242 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 DNAJA4Q8WW22 397 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-210ENST00000482158 SEC22AQ96IW7 307 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 NT5C3AQ9H0P0 336 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 NARFLQ9H6Q4 476 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 CLEC4AQ9UMR7 237 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 ATRXP46100 2492 aa3.82□□□□□ -1.8
SF3B1-210ENST00000482158 A0A0G2JLM5 398 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 HELTA6NFD8 242 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 A6NIZ1 184 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 H0Y9J4 135 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 ABCD4O14678 606 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 NPIPB7O75200 414 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 SCGNO76038 276 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 IL1BP01584 269 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 CXCR2P25025 360 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 SHMT2P34897 504 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 AIF1P55008 147 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 PKNOX1P55347 436 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 RAP1BP61224 184 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 DUSP7Q16829 419 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 DMRTC1Q5HYR2 192 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 C1orf100Q5SVJ3 147 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 CASC10Q5T4H9 136 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 CENPPQ6IPU0 288 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 PMF1Q6P1K2 205 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 GDPD3Q7L5L3 318 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 DHDDSQ86SQ9 333 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 LRRC75A-AS1Q8N1F1 130 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 OR52H1Q8NGJ2 320 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 FBXO30Q8TB52 745 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 SCFD1Q8WVM8 642 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 HIST1H4GQ99525 98 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 TSG101Q99816 390 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 MRPL45Q9BRJ2 306 aaKnown RBP3.81□□□□□ -1.8
SF3B1-210ENST00000482158 HES7Q9BYE0 225 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 POLR2J2Q9GZM3 115 aaKnown RBP3.81□□□□□ -1.8
SF3B1-210ENST00000482158 POLR2J3Q9H1A7 115 aaKnown RBP3.81□□□□□ -1.8
SF3B1-210ENST00000482158 REEP4Q9H6H4 257 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 HOXC10Q9NYD6 342 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 C6orf203Q9P0P8 240 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-210ENST00000482158 RPS6KB2Q9UBS0 482 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 ADAM28Q9UKQ2 775 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 CDH9Q9ULB4 789 aa3.81□□□□□ -1.8
SF3B1-210ENST00000482158 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
SF3B1-210ENST00000482158 A8MUA0 341 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 CXCL11O14625 94 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 ZNF208O43345 1280 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 HSMCR30P0CW71 290 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 COX7A1P24310 79 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 CCNE1P24864 410 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 HTR1EP28566 365 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 GNA11P29992 359 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 RFC4P35249 363 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 DRD3P35462 400 aa3.8□□□□□ -1.8
SF3B1-210ENST00000482158 MAGEA8P43361 318 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms