RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 EMBQ6PCB8 327 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 CATSPER3Q86XQ3 398 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 OR52I1Q8NGK6 324 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 OR4A4PQ8NGN8 299 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 RHEBL1Q8TAI7 183 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 FAM76AQ8TAV0 307 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 ZPLD1Q8TCW7 415 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 DTX3LQ8TDB6 740 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 MS4A14Q96JA4 679 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 TBX15Q96SF7 602 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 RACGAP1Q9H0H5 632 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 RBKSQ9H477 322 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 FBXO44Q9H4M3 255 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 CAB39LQ9H9S4 337 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 SDF2L1Q9HCN8 221 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 B3GNT2Q9NY97 397 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 PRODH2Q9UF12 536 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 KCNIP3Q9Y2W7 256 aa4.28□□□□□ -1.72
COPA-203ENST00000481040 USP47Q96K76 1375 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 PLEKHH1Q9ULM0 1364 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 SMCO2A6NFE2 343 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 G3V3Y1 287 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 CHMP2AO43633 222 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 TOM1O60784 492 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 OR7A10O76100 309 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 C1orf105O95561 183 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 TGM6O95932 706 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 MBP02144 154 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 ANXA5P08758 320 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 STAG3L2P0CL84 134 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 ABOP16442 354 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 EIF2S2P20042 333 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 ANOS1P23352 680 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 LMO2P25791 158 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 VHLP40337 213 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 ABRAXAS2Q15018 415 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 DGUOKQ16854 277 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 MICAQ29983 383 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 HNRNPA1L2Q32P51 320 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 C9orf135Q5VTT2 229 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 SLC25A48Q6ZT89 311 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 PGAP1Q75T13 922 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 MMAAQ8IVH4 418 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 IQCF2Q8IXL9 164 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 SVOPLQ8N434 492 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 CSGALNACT2Q8N6G5 542 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 C8orf44Q96CB5 159 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 OXGR1Q96P68 337 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 PGLYRP2Q96PD5 576 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 IL22Q9GZX6 179 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 UPF3AQ9H1J1 476 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 OPN3Q9H1Y3 402 aaPredicted RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 UGT1A10Q9HAW8 530 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 PXMP2Q9NR77 195 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 AGPAT3Q9NRZ7 376 aa4.27□□□□□ -1.73
COPA-203ENST00000481040 THUMPD1Q9NXG2 353 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 MRPL11Q9Y3B7 192 aaKnown RBP4.27□□□□□ -1.73
COPA-203ENST00000481040 A0A0J9YYE9 177 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 ZNF879B4DU55 563 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 GFYI3L273 518 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 NR5A2O00482 541 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 RAB29O14966 203 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 POLR3GO15318 223 aaPredicted RBP4.26□□□□□ -1.73
COPA-203ENST00000481040 IDH3BO43837 385 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 HCN1O60741 890 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 TSPAN13O95857 204 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 SNAI1O95863 264 aaPredicted RBP4.26□□□□□ -1.73
COPA-203ENST00000481040 NPPAP01160 153 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 IGLV1-44P01699 117 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 TRBC1P01850 177 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 AMBPP02760 352 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 UBTFL1P0CB47 393 aaPredicted RBP4.26□□□□□ -1.73
COPA-203ENST00000481040 CT45A10P0DMU9 189 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 GATA1P15976 413 aaPredicted RBP4.26□□□□□ -1.73
COPA-203ENST00000481040 HOXD10P28358 340 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 DDOSTP39656 456 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 PTGDSP41222 190 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 KPNA2P52292 529 aaKnown RBP4.26□□□□□ -1.73
COPA-203ENST00000481040 YWHAGP61981 247 aaKnown RBP eCLIP4.26□□□□□ -1.73
COPA-203ENST00000481040 MRPS11P82912 194 aaKnown RBP4.26□□□□□ -1.73
COPA-203ENST00000481040 OR5I1Q13606 314 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 GNMTQ14749 295 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 ZFP69Q49AA0 526 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 C9orf66Q5T8R8 295 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 C22orf42Q6IC83 251 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 OR52E8Q6IFG1 317 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 REG3GQ6UW15 175 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 Q6ZSR3 168 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 SLC16A14Q7RTX9 510 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 LRRTM1Q86UE6 522 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 MCOLN2Q8IZK6 566 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 ZNF614Q8N883 585 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 Q8NBF4 154 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 OR56B4Q8NH76 319 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 PAQR8Q8TEZ7 354 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 NR4A3Q92570 626 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 TMIGD2Q96BF3 282 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 MCHR1Q99705 422 aa4.26□□□□□ -1.73
COPA-203ENST00000481040 RBM4BQ9BQ04 359 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms