RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ING1Q9UK53 422 aaPredicted RBP10.13□□□□□ -0.79
CCM2-213ENST00000480658 SLC13A4Q9UKG4 626 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 AMDHD2Q9Y303 409 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 PRRC2AP48634 2157 aaKnown RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 PRAMEF27A3QJZ7 478 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 CLIC1O00299 241 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 AKAP8O43823 692 aaKnown RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 SERPINB7O75635 380 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 LYZL6O75951 148 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 WNT11O96014 354 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 HEXAP06865 529 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 PNMTP11086 282 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 MVDP53602 400 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 ATP5J2P56134 94 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 BSPH1Q075Z2 132 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 SQLEQ14534 574 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 COX20Q5RI15 118 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 OTUD3Q5T2D3 398 aaPredicted RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 LRIF1Q5T3J3 769 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 TMEM225Q6GV28 225 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 BLOC1S3Q6QNY0 202 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 CASP12Q6UXS9 341 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 ZNF836Q6ZNA1 936 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 SLC30A8Q8IWU4 369 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 DNAJA4Q8WW22 397 aaPredicted RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 GTF2H4Q92759 462 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 ZG16BQ96DA0 208 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 SPDL1Q96EA4 605 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 PERPQ96FX8 193 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 ARL5BQ96KC2 179 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 OR52B2Q96RD2 323 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 FKRPQ9H9S5 495 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 INTS9Q9NV88 658 aaKnown RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 FBXO9Q9UK97 447 aaPredicted RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 RASD1Q9Y272 281 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 PCDHB14Q9Y5E9 798 aa10.12□□□□□ -0.79
CCM2-213ENST00000480658 TEP1Q99973 2627 aaKnown RBP10.12□□□□□ -0.79
CCM2-213ENST00000480658 TMEM72A0PK05 275 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 AQP7P3A6NL99 342 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 CLDN24A6NM45 220 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 C9JVG2 144 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 AP3D1O14617 1153 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 KRT33AO76009 404 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 AHSA1O95433 338 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 IGHV1-2P23083 117 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 SLC6A2P23975 617 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 SH3BGRP55822 239 aaPredicted RBP10.11□□□□□ -0.79
CCM2-213ENST00000480658 SLC17A1Q14916 467 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 GCNT6Q5T4J0 391 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
CCM2-213ENST00000480658 AGAP6Q5VW22 663 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 FAM91A1Q658Y4 838 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 REEP3Q6NUK4 255 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 C6orf89Q6UWU4 347 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 CLEC9AQ6UXN8 241 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 MAVSQ7Z434 540 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 CADM2Q8N3J6 435 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 ZNF433Q8N7K0 673 aaPredicted RBP10.11□□□□□ -0.79
CCM2-213ENST00000480658 LSMEM1Q8N8F7 131 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 TSPEARQ8WU66 669 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 SMAP2Q8WU79 429 aaPredicted RBP10.11□□□□□ -0.79
CCM2-213ENST00000480658 IGFBPL1Q8WX77 278 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 VPS33AQ96AX1 596 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 BOD1Q96IK1 185 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 MAGEB18Q96M61 343 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 Q96MF0 132 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 EPYCQ99645 322 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 AMBRA1Q9C0C7 1298 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 OR11A1Q9GZK7 315 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 SLCO5A1Q9H2Y9 848 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 TMEM38AQ9H6F2 299 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 CCDC167Q9P0B6 97 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 TESQ9UGI8 421 aaKnown RBP10.11□□□□□ -0.79
CCM2-213ENST00000480658 PRSS50Q9UI38 385 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 LAMP3Q9UQV4 416 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 ANGPT4Q9Y264 503 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 FLVCR1Q9Y5Y0 555 aa10.11□□□□□ -0.79
CCM2-213ENST00000480658 RAI1Q7Z5J4 1906 aaPredicted RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 LIPT2A6NK58 231 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ELOA3DA6NLF2 546 aaPredicted RBP10.1□□□□□ -0.79
CCM2-213ENST00000480658 ZNF587BE7ETH6 402 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ABCD4O14678 606 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ANGPT2O15123 496 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 RAD51DO75771 328 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 MPGP29372 298 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 IDH3AP50213 366 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 AQP5P55064 265 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 CDH11P55287 796 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 RBBP4Q09028 425 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 FAPQ12884 760 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 OR7A5Q15622 319 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ELOA3BQ3SY89 546 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 C1orf140Q5VVS0 124 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 METTL21CQ5VZV1 264 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 ZNF544Q6NX49 715 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 C22orf34Q6ZV56 151 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 OLIG3Q7RTU3 272 aa10.1□□□□□ -0.79
CCM2-213ENST00000480658 NET1Q7Z628 596 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms