RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 GSC2O15499 205 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 EIF1BO60739 113 aaKnown RBP17.65■□□□□ 0.42
LIME1-205ENST00000480139 PRKD3O94806 890 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 TMIGD3P0DMS9 266 aaPredicted RBP17.65■□□□□ 0.42
LIME1-205ENST00000480139 IMPDH2P12268 514 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 ENPP1P22413 925 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 CTSSP25774 331 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 TAS2R41P59536 307 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 SLC35A1P78382 337 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 TRAP1Q12931 704 aaKnown RBP17.65■□□□□ 0.42
LIME1-205ENST00000480139 RNPS1Q15287 305 aaKnown RBP17.65■□□□□ 0.42
LIME1-205ENST00000480139 GUSBP1Q15486 140 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 GTF2IRD2BQ6EKJ0 949 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 GDF7Q7Z4P5 450 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 GTF2IRD2Q86UP8 949 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 DHFR2Q86XF0 187 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 OR6S1Q8NH40 331 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 SLC41A3Q96GZ6 507 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 PYURFQ96I23 114 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 GMPPAQ96IJ6 420 aaPredicted RBP17.65■□□□□ 0.42
LIME1-205ENST00000480139 CLPTM1LQ96KA5 538 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 LRMDAQ9H2I8 198 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 SLC7A7Q9UM01 511 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 A4GNTQ9UNA3 340 aa17.65■□□□□ 0.42
LIME1-205ENST00000480139 LIPT2A6NK58 231 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 EBAG9O00559 213 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 SMAD9O15198 467 aaKnown RBP17.64■□□□□ 0.41
LIME1-205ENST00000480139 OR2T1O43869 369 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 AHSA1O95433 338 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 SEMG1P04279 462 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 GPIP06744 558 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 ATP6V1B2P21281 511 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 IFNA8P32881 189 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 OPRM1P35372 400 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 H3F3AP84243 136 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 MS4A2Q01362 244 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 PIN1Q13526 163 aaPredicted RBP17.64■□□□□ 0.41
LIME1-205ENST00000480139 FCRLAQ7L513 359 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 CCDC71Q8IV32 467 aaPredicted RBP17.64■□□□□ 0.41
LIME1-205ENST00000480139 FAM86B1Q8N7N1 296 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 LILRB4Q8NHJ6 448 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 MFSD8Q8NHS3 518 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 CCDC124Q96CT7 223 aaKnown RBP17.64■□□□□ 0.41
LIME1-205ENST00000480139 C7orf34Q96L11 122 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 EPYCQ99645 322 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 PRSS27Q9BQR3 290 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 PTDSS2Q9BVG9 487 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 CADM1Q9BY67 442 aaKnown RBP17.64■□□□□ 0.41
LIME1-205ENST00000480139 SLC19A3Q9BZV2 496 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 MMADHCQ9H3L0 296 aaPredicted RBP17.64■□□□□ 0.41
LIME1-205ENST00000480139 RIMS3Q9UJD0 308 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 ENPP4Q9Y6X5 453 aa17.64■□□□□ 0.41
LIME1-205ENST00000480139 TRAV36DV7A0A075B6V5 113 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 FTCDNL1E5RQL4 147 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 DVL2O14641 736 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 ACOT8O14734 319 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 CYTIPO60759 359 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 SS18L1O75177 396 aaPredicted RBP17.63■□□□□ 0.41
LIME1-205ENST00000480139 CLDN14O95500 239 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 STAMBPO95630 424 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 RBM34P42696 430 aaKnown RBP17.63■□□□□ 0.41
LIME1-205ENST00000480139 OR2B6P58173 313 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 ST3GAL3Q11203 375 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 SLC25A35Q3KQZ1 300 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 FAM69AQ5T7M9 428 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 ABLIM2Q6H8Q1 611 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 PPP4R4Q6NUP7 873 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 PAQR6Q6TCH4 344 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 CYP2R1Q6VVX0 501 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 WDR88Q6ZMY6 472 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 CCDC121Q6ZUS5 278 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 OFCC1Q8IZS5 231 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 GCNT2Q8N0V5 402 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 RNF217Q8TC41 542 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 CA5BP1Q8WTZ4 195 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 ROBO4Q8WZ75 1007 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 INTS12Q96CB8 462 aaKnown RBP17.63■□□□□ 0.41
LIME1-205ENST00000480139 KTI12Q96EK9 354 aaPredicted RBP17.63■□□□□ 0.41
LIME1-205ENST00000480139 TACO1Q9BSH4 297 aaKnown RBP17.63■□□□□ 0.41
LIME1-205ENST00000480139 TAPBPLQ9BX59 468 aa17.63■□□□□ 0.41
LIME1-205ENST00000480139 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.63■□□□□ 0.41
LIME1-205ENST00000480139 INTS1Q8N201 2190 aaKnown RBP17.62■□□□□ 0.41
LIME1-205ENST00000480139 A0A1W2PNV4 684 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 TCRBV5S2A0A599 114 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 TNFSF13O75888 250 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 PRSS23O95084 383 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 FPR1P21462 350 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 FOXF2Q12947 444 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 PDK3Q15120 406 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 TTC33Q6PID6 262 aaPredicted RBP17.62■□□□□ 0.41
LIME1-205ENST00000480139 FAM214BQ7L5A3 538 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 TSEN54Q7Z6J9 526 aaKnown RBP17.62■□□□□ 0.41
LIME1-205ENST00000480139 CYP4Z1Q86W10 505 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 PIGXQ8TBF5 258 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 MCUR1Q96AQ8 359 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 ZNF300Q96RE9 604 aaPredicted RBP17.62■□□□□ 0.41
LIME1-205ENST00000480139 NAA11Q9BSU3 229 aaPredicted RBP17.62■□□□□ 0.41
LIME1-205ENST00000480139 TRIM15Q9C019 465 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 NDUFAF4Q9P032 175 aa17.62■□□□□ 0.41
LIME1-205ENST00000480139 KLHL9Q9P2J3 617 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms