RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 NPSR1Q6W5P4 371 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 HACD2Q6Y1H2 254 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 C16orf47Q6ZP98 133 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 WDR53Q7Z5U6 358 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 AKAP14Q86UN6 197 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SLC30A8Q8IWU4 369 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 CLEC4FQ8N1N0 589 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 FBXW8Q8N3Y1 598 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PRR18Q8N4B5 295 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 BCORP1Q8N888 145 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ASCC1Q8N9N2 400 aaKnown RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 POGLUT1Q8NBL1 392 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ZBTB34Q8NCN2 500 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PSD4Q8NDX1 1056 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PIK3C3Q8NEB9 887 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 OR8J3Q8NGG0 315 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 OR5D16Q8NGK9 328 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 OR5M3Q8NGP4 307 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 LHFPL5Q8TAF8 219 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SPPL2AQ8TCT8 520 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 OIT3Q8WWZ8 545 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PIK3R3Q92569 461 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 HOXB13Q92826 284 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PNPLA2Q96AD5 504 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 LRRC58Q96CX6 371 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 RCN3Q96D15 328 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SLC35A4Q96G79 324 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 C16orf58Q96GQ5 468 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ADOQ96SZ5 270 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 TBL1XR1Q9BZK7 514 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 TRIM15Q9C019 465 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 SLC52A3Q9NQ40 469 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 KLHL1Q9NR64 748 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 POLE3Q9NRF9 147 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 DCAF16Q9NXF7 216 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 VAPAQ9P0L0 249 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 MBD2Q9UBB5 411 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ANAPC2Q9UJX6 822 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 BOKQ9UMX3 212 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-209ENST00000479532 ABCG2Q9UNQ0 655 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 WDR45Q9Y484 360 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PCDHGB6Q9Y5F9 930 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PMF1-BGLAPU3KQ54 211 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 PTPRQQ9UMZ3 2332 aa5.64□□□□□ -1.51
SF3B1-209ENST00000479532 FRYQ5TBA9 3013 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 ACACBO00763 2458 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 GXYLT2A0PJZ3 443 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 HMGN4O00479 90 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 SLC28A2O43868 658 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 NME2P1O60361 137 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM127O75204 238 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 UGT2B11O75310 529 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 NEURL1O76050 574 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 KCNK2O95069 426 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 SNX4O95219 450 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 BAG2O95816 211 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 PTTG1O95997 202 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CRYABP02511 175 aaKnown RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 BCHEP06276 602 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 GUSBP08236 651 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CYP4B1P13584 511 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 ETFAP13804 333 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CNR1P21554 472 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 TCEA1P23193 301 aaKnown RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 SLC6A2P23975 617 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CD40LGP29965 261 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 PRKAR1BP31321 381 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 EVI2BP34910 448 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 MAP3K8P41279 467 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CLK1P49759 484 aaKnown RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 BMXP51813 675 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CRISP3P54108 245 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CASP9P55211 416 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 PLGLB1Q02325 96 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 RUNX1T1Q06455 604 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CD69Q07108 199 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 RBBP4Q09028 425 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 SELENBP1Q13228 472 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CCNIQ14094 377 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 LY6DQ14210 128 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 GALEQ14376 348 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CAPRIN1Q14444 709 aaKnown RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF630Q2M218 657 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 GTDC1Q4AE62 458 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 INTS11Q5TA45 600 aaKnown RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 SLC30A6Q6NXT4 461 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 RPUSD3Q6P087 351 aaKnown RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 ERICH5Q6P6B1 374 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM81Q6P7N7 255 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 FAM180AQ6UWF9 173 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 DLEU7Q6UYE1 221 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 PLEKHG7Q6ZR37 379 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 Q6ZS92 163 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 GALNTL5Q7Z4T8 443 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 KCTD20Q7Z5Y7 419 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 SERPINA11Q86U17 422 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 KRT73Q86Y46 540 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 CLVS1Q8IUQ0 354 aaPredicted RBP5.63□□□□□ -1.51
SF3B1-209ENST00000479532 MISPQ8IVT2 679 aa5.63□□□□□ -1.51
SF3B1-209ENST00000479532 RBMXL3Q8N7X1 1067 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms