RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 VWA1Q6PCB0 445 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 GDF7Q7Z4P5 450 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 STK32CQ86UX6 486 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 MFSD8Q8NHS3 518 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 PIGXQ8TBF5 258 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 SLC26A7Q8TE54 656 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 FAM222BQ8WU58 562 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 ROBO4Q8WZ75 1007 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 NAA11Q9BSU3 229 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-217ENST00000479161 OR11A1Q9GZK7 315 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 SPAG4Q9NPE6 437 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 NDE1Q9NXR1 346 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 RPS6KB2Q9UBS0 482 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 ING1Q9UK53 422 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-217ENST00000479161 PROCRQ9UNN8 238 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 SLC9A8Q9Y2E8 581 aa13.79□□□□□ -0.2
C9orf3-217ENST00000479161 A0A087WUJ7 227 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 A0A0B4J2E0 115 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 A0A1B0GWA3 101 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 A0A1B0GX12 115 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 LIPT2A6NK58 231 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 NME4O00746 187 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 FRS3O43559 492 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 TPST2O60704 377 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 VAMP5O95183 116 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 IMPDH2P12268 514 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 HTR2AP28223 471 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 IDUAP35475 653 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 CD79BP40259 229 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 LIPEQ05469 1076 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 RASGEF1BQ0VAM2 473 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 OR1Q1Q15612 314 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 ALG10BQ5I7T1 473 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 HIST2H2BCQ6DN03 193 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 ZNF474Q6S9Z5 364 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-217ENST00000479161 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 ZNF295-AS1Q8N0V1 137 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 SMYD1Q8NB12 490 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 USB1Q9BQ65 265 aaKnown RBP13.78□□□□□ -0.2
C9orf3-217ENST00000479161 TMEM43Q9BTV4 400 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 SF3B5Q9BWJ5 86 aaKnown RBP13.78□□□□□ -0.2
C9orf3-217ENST00000479161 ALG2Q9H553 416 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 GALNT8Q9NY28 637 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 EMC3Q9P0I2 261 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 TAGLN3Q9UI15 199 aa13.78□□□□□ -0.2
C9orf3-217ENST00000479161 ZC3H12DA2A288 527 aaKnown RBP13.77□□□□□ -0.21
C9orf3-217ENST00000479161 FAM221AA4D161 298 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-217ENST00000479161 CCT8L1PA6NM43 557 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 ZNF716A6NP11 495 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 UQCRC1P31930 480 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 KIR2DL3P43628 341 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 CPA2P48052 419 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 SLC7A2P52569 658 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 PSME3P61289 254 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 SELENOWP63302 87 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 EGR4Q05215 589 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 MFSD13AQ14CX5 517 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 DAZAP2Q15038 168 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-217ENST00000479161 FXNQ16595 210 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 ELOA3BQ3SY89 546 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 C1orf140Q5VVS0 124 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 ZNF610Q8N9Z0 462 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 CCDC197Q8NCU1 140 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 ELOA3Q8NG57 546 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 OR6T1Q8NGN1 323 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 PROX1Q92786 737 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 MPP4Q96JB8 637 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 DACH2Q96NX9 599 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 SELENONQ9NZV5 590 aa13.77□□□□□ -0.21
C9orf3-217ENST00000479161 LOC102725191A0A1B0GVB3 256 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 FTCDNL1E5RQL4 147 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 CHP2O43745 196 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 SMNDC1O75940 238 aaKnown RBP eCLIP13.76□□□□□ -0.21
C9orf3-217ENST00000479161 IGF2P01344 180 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 THRBP10828 461 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 EPXP11678 715 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 PPP3CBP16298 524 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 FPR1P21462 350 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 OR3A2P47893 321 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 GSK3BP49841 420 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 OR2B6P58173 313 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 SIRPAP78324 504 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 HOXC5Q00444 222 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 FAM69AQ5T7M9 428 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 GALNT5Q7Z7M9 940 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 LUZP2Q86TE4 346 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 LURAP1LQ8IV03 231 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 TUSC5Q8IXB3 177 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 PGAM4Q8N0Y7 254 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 FITM2Q8N6M3 262 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 LZICQ8WZA0 190 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 EPYCQ99645 322 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 MCHR1Q99705 422 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 WFDC6Q9BQY6 131 aa13.76□□□□□ -0.21
C9orf3-217ENST00000479161 ZNF426Q9BUY5 554 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms