RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LINC00114Q6XXX2 140 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 TSPYL5Q86VY4 417 aaPredicted RBP23.95■■□□□ 1.42
CCM2-211ENST00000478582 GEMIN6Q8WXD5 167 aaKnown RBP23.95■■□□□ 1.42
CCM2-211ENST00000478582 HSH2DQ96JZ2 352 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 PRRG4Q9BZD6 226 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 MUC13Q9H3R2 512 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 ACTR3BQ9P1U1 418 aa23.95■■□□□ 1.42
CCM2-211ENST00000478582 CHP2O43745 196 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 LYPD3O95274 346 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 TMIGD3P0DMS9 266 aaPredicted RBP23.94■■□□□ 1.42
CCM2-211ENST00000478582 IMPDH2P12268 514 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 COX6B1P14854 86 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 AGFG1P52594 562 aaKnown RBP23.94■■□□□ 1.42
CCM2-211ENST00000478582 EGR4Q05215 589 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 EEF1A1P5Q5VTE0 462 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 NSMCE2Q96MF7 247 aa23.94■■□□□ 1.42
CCM2-211ENST00000478582 THY1P04216 161 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 IDUAP35475 653 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 RASSF2P50749 326 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 TRIM25Q14258 630 aaKnown RBP23.93■■□□□ 1.42
CCM2-211ENST00000478582 GUSBP1Q15486 140 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 C1orf140Q5VVS0 124 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 GTF2IRD2BQ6EKJ0 949 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 DEF8Q6ZN54 512 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 FKBP9P1Q75LS8 142 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 GTF2IRD2Q86UP8 949 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 MCEMP1Q8IX19 187 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 RNF128Q8TEB7 428 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 ROBO4Q8WZ75 1007 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 INTS12Q96CB8 462 aaKnown RBP23.93■■□□□ 1.42
CCM2-211ENST00000478582 THTPAQ9BU02 230 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 SFXN3Q9BWM7 321 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 AMBRA1Q9C0C7 1298 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 GLRX2Q9NS18 164 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 ITPR2Q14571 2701 aa23.93■■□□□ 1.42
CCM2-211ENST00000478582 IGKV1D-42A0A075B6H8 117 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 OR5F1O95221 314 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 IFNW1P05000 195 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 THRBP10828 461 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 PRF1P14222 555 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 ENPP1P22413 925 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 OPRM1P35372 400 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 SLC35A1P78382 337 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 FOXF2Q12947 444 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 PGM2L1Q6PCE3 622 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 FCRLAQ7L513 359 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 LIX1LQ8IVB5 337 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 SLC43A2Q8N370 569 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 MPP4Q96JB8 637 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 TMEM43Q9BTV4 400 aa23.92■■□□□ 1.42
CCM2-211ENST00000478582 LIPT2A6NK58 231 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 DVL2O14641 736 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 SMAD9O15198 467 aaKnown RBP23.91■■□□□ 1.42
CCM2-211ENST00000478582 EIF1BO60739 113 aaKnown RBP23.91■■□□□ 1.42
CCM2-211ENST00000478582 PDE5AO76074 875 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 OR2B6P58173 313 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 H3F3AP84243 136 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 RNPS1Q15287 305 aaKnown RBP23.91■■□□□ 1.42
CCM2-211ENST00000478582 PPP4R4Q6NUP7 873 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 ZHX1-C8orf76Q96EF9 292 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 SLC41A3Q96GZ6 507 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 GMPPAQ96IJ6 420 aaPredicted RBP23.91■■□□□ 1.42
CCM2-211ENST00000478582 GP6Q9HCN6 339 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 PKDREJQ9NTG1 2253 aa23.91■■□□□ 1.42
CCM2-211ENST00000478582 DOCK7Q96N67 2140 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 A0A1W2PNV4 684 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 CYTIPO60759 359 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 FZD7O75084 574 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 DNAJC8O75937 253 aaPredicted RBP23.9■■□□□ 1.42
CCM2-211ENST00000478582 PRKD3O94806 890 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 AHSA1O95433 338 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 GPIP06744 558 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 TAS2R41P59536 307 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 MS4A2Q01362 244 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 PIN1Q13526 163 aaPredicted RBP23.9■■□□□ 1.42
CCM2-211ENST00000478582 SLC25A35Q3KQZ1 300 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 MTX3Q5HYI7 312 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 LCN8Q6JVE9 175 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 GDF7Q7Z4P5 450 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 LSRQ86X29 649 aaPredicted RBP23.9■■□□□ 1.42
CCM2-211ENST00000478582 GCNT2Q8N0V5 402 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 OR6S1Q8NH40 331 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 MFSD8Q8NHS3 518 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 RNF217Q8TC41 542 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 ASB9Q96DX5 294 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 PYURFQ96I23 114 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 CLPTM1LQ96KA5 538 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 PRRC1Q96M27 445 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 SPOCK3Q9BQ16 436 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 ZNF426Q9BUY5 554 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 PTDSS2Q9BVG9 487 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 UCK2Q9BZX2 261 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 ENKD1Q9H0I2 346 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 KCNJ16Q9NPI9 418 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 RIMS3Q9UJD0 308 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 SLC7A7Q9UM01 511 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 A4GNTQ9UNA3 340 aa23.9■■□□□ 1.42
CCM2-211ENST00000478582 FTCDNL1E5RQL4 147 aa23.89■■□□□ 1.41
CCM2-211ENST00000478582 OR2T1O43869 369 aa23.89■■□□□ 1.41
CCM2-211ENST00000478582 SS18L1O75177 396 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms