RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 LPCAT2Q7L5N7 544 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 BHLHA15Q7RTS1 189 aaPredicted RBP0.78□□□□□ -2.28
HPS3-205ENST00000478525 C15orf54Q8N8G6 183 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 ANKRD20A12PQ8NF67 263 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 ZMAT2Q96NC0 199 aaKnown RBP0.78□□□□□ -2.28
HPS3-205ENST00000478525 DUSP16Q9BY84 665 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 ZNRD1Q9P1U0 126 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 CCDC7Q96M83 1385 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 PEX7O00628 323 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 PRKYO43930 277 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 OMGP23515 440 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 BDNFP23560 247 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 SHMT2P34897 504 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 PRKXP51817 358 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 SRP54P61011 504 aaKnown RBP0.77□□□□□ -2.29
HPS3-205ENST00000478525 CDC20Q12834 499 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 SCARB2Q14108 478 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 ATP6AP1Q15904 470 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 GUCA2BQ16661 112 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 ZNF571Q7Z3V5 609 aaPredicted RBP0.77□□□□□ -2.29
HPS3-205ENST00000478525 LGI3Q8N145 548 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 TMEM185AQ8NFB2 350 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 ACTRT1Q8TDG2 376 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 CD300LFQ8TDQ1 290 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 ST8SIA1Q92185 356 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 ERP27Q96DN0 273 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 L3HYPDHQ96EM0 354 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 RNF5Q99942 180 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 SULT4A1Q9BR01 284 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 SLC30A2Q9BRI3 323 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 NAT10Q9H0A0 1025 aaKnown RBP0.77□□□□□ -2.29
HPS3-205ENST00000478525 SRMSQ9H3Y6 488 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 ZCCHC17Q9NP64 241 aaKnown RBP0.77□□□□□ -2.29
HPS3-205ENST00000478525 ANAPC7Q9UJX3 599 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 TMEM14AQ9Y6G1 99 aa0.77□□□□□ -2.29
HPS3-205ENST00000478525 INS-IGF2F8WCM5 200 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 IL4P05112 153 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 CYP2B6P20813 491 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 CNR1P21554 472 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 CALB2P22676 271 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 BTCP35070 178 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 LEPP41159 167 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 OSTNP61366 133 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 ESRRGP62508 458 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 ADARB1P78563 741 aaKnown RBP0.76□□□□□ -2.29
HPS3-205ENST00000478525 EXOSC2Q13868 293 aaKnown RBP0.76□□□□□ -2.29
HPS3-205ENST00000478525 TIGD3Q6B0B8 471 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 HCP5Q6MZN7 132 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 ACSM5Q6NUN0 579 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 APTXQ7Z2E3 356 aaKnown RBP0.76□□□□□ -2.29
HPS3-205ENST00000478525 ANKRD37Q7Z713 158 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 EFCAB13Q8IY85 973 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 SYT14Q8NB59 555 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 NECAP1Q8NC96 275 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 OR1P1Q8NH06 330 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 RNF139Q8WU17 664 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 RAPGEF5Q92565 580 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 NEURL3Q96EH8 262 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 ZNF560Q96MR9 790 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 RNF157Q96PX1 679 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 DOK1Q99704 481 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 TM9SF3Q9HD45 589 aa0.76□□□□□ -2.29
HPS3-205ENST00000478525 SH3TC1Q8TE82 1336 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 CHST1O43916 411 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 HSF2BPO75031 334 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 UGT2B17O75795 530 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 F10P00742 488 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 ARL14EPLP0DKL9 152 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 UQCRBP14927 111 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 ZNF30P17039 623 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 DPP4P27487 766 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 GLP1RP43220 463 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 FLI1Q01543 452 aaPredicted RBP0.75□□□□□ -2.29
HPS3-205ENST00000478525 PARP10Q53GL7 1025 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 VAX1Q5SQQ9 334 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 TMEM225Q6GV28 225 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 OAFQ86UD1 273 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 SFRP1Q8N474 314 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 Q8NDZ9 215 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 OR51G2Q8NGK0 314 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 RPL3LQ92901 407 aaKnown RBP0.75□□□□□ -2.29
HPS3-205ENST00000478525 DNAJC19Q96DA6 116 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 CCNL2Q96S94 520 aaPredicted RBP0.75□□□□□ -2.29
HPS3-205ENST00000478525 ZNF717Q9BY31 904 aaPredicted RBP0.75□□□□□ -2.29
HPS3-205ENST00000478525 DDX47Q9H0S4 455 aaKnown RBP0.75□□□□□ -2.29
HPS3-205ENST00000478525 LPAR2Q9HBW0 351 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 ZFP14Q9HCL3 533 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 SLCO1B3Q9NPD5 702 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 QPCTLQ9NXS2 382 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 SIGLEC9Q9Y336 463 aa0.75□□□□□ -2.29
HPS3-205ENST00000478525 HELZ2Q9BYK8 2649 aaKnown RBP0.75□□□□□ -2.29
HPS3-205ENST00000478525 ATP10DQ9P241 1426 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 PRSS37A4D1T9 235 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 RBMY1BA6NDE4 496 aaKnown RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 RBMY1EA6NEQ0 496 aaKnown RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 E7ESA3 106 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 DNASE2O00115 360 aaPredicted RBP0.74□□□□□ -2.29
HPS3-205ENST00000478525 SGK1O00141 431 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 LGALS9O00182 355 aa0.74□□□□□ -2.29
HPS3-205ENST00000478525 SLC7A4O43246 635 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms