RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 MDH2P40926 338 aaKnown RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 RGS8P57771 180 aaPredicted RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 HERVK_113P63132 956 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 ERVK-8P63133 956 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 CXCL6P80162 114 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 IGLV3-21P80748 117 aaPredicted RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 MRPS6P82932 125 aaKnown RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 OTUD4Q01804 1114 aaKnown RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 GK3PQ14409 553 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 BEX5Q5H9J7 111 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 MLIPQ5VWP3 458 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 AP1ARQ63HQ0 302 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 WSCD1Q658N2 575 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 SLC25A25Q6KCM7 469 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 TTC23LQ6PF05 361 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 VRK2Q86Y07 508 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 CENPSQ8N2Z9 138 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 PQLC3Q8N755 202 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 Q8N9G6 341 aaPredicted RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 PAQR8Q8TEZ7 354 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 RAB1CQ92928 201 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 TSNARE1Q96NA8 513 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 CENPKQ9BS16 269 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 TRIM62Q9BVG3 475 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 TSSK1BQ9BXA7 367 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 BBS2Q9BXC9 721 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 TEKT3Q9BXF9 490 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 ERVK-6Q9BXR3 956 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 PARD6BQ9BYG5 372 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 DEFB126Q9BYW3 111 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 LRRN3Q9H3W5 708 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 NARFLQ9H6Q4 476 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 AZI2Q9H6S1 392 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 LYRM4Q9HD34 91 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 IL26Q9NPH9 171 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 C1orf123Q9NWV4 160 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 MTCH1Q9NZJ7 389 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 GNG12Q9UBI6 72 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 Q9UF83 564 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 RNF6Q9Y252 685 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 ZNF646O15015 1829 aaPredicted RBP2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 SH3TC1Q8TE82 1336 aa2.9□□□□□ -1.95
SMARCA1-204ENST00000478420 PNPLA6Q8IY17 1366 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 TRAV6A0A075B6T7 132 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 PPIAL4EA0A075B759 164 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 TRBV7-9A0A0J9YWB2 115 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 A0A1B0GUH1 482 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ERICH2A1L162 156 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 G3V3Y1 287 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 DLGAP1O14490 977 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 HAT1O14929 419 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 RS1O15537 224 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 NIPSNAP2O75323 286 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 CBR3O75828 277 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 CABYRO75952 493 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SCGNO76038 276 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 H6PDO95479 791 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 APOA1P02647 267 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 OPN1LWP04000 364 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 IGF1P05019 195 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ERCC1P07992 297 aaPredicted RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 PLEKP08567 350 aaPredicted RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 GIG44P09565 113 aaPredicted RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SLC35E2P0CK97 266 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 PPIAL4FP0DN26 164 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 MCF2P10911 925 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 IDSP22304 550 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 IGFBP5P24593 272 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 OTX1P32242 354 aaPredicted RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 RORAP35398 523 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 UGT1A5P35504 534 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 MEOX2P50222 304 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 IL9RQ01113 521 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 EWSR1Q01844 656 aaKnown RBP eCLIP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SRYQ05066 204 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ASPHQ12797 758 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 C1orf61Q13536 156 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 TFDP1Q14186 410 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 GANABQ14697 944 aaKnown RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 TGIF1Q15583 401 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SBK1Q52WX2 424 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SFT2D3Q587I9 215 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 DMKNQ6E0U4 476 aaPredicted RBP2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ZNF562Q6V9R5 426 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 CCDC80Q76M96 950 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 Q7L0L9 218 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 P4HA3Q7Z4N8 544 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SCD5Q86SK9 330 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 MICU2Q8IYU8 434 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 CLEC4FQ8N1N0 589 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ZNF525Q8N782 197 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 FAM86B1Q8N7N1 296 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 CEP112Q8N8E3 955 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 MFSD9Q8NBP5 474 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 SDR9C7Q8NEX9 313 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 OR1F12Q8NHA8 337 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 NDNFQ8TB73 568 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 ZNF596Q8TC21 504 aa2.89□□□□□ -1.95
SMARCA1-204ENST00000478420 FNDC8Q8TC99 324 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms