RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 B2RBV5 119 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF814B7Z6K7 855 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 RAMP1O60894 148 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 SS18L1O75177 396 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 PMS2P2O95744 297 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 SERPINA1P01009 418 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 FPR1P21462 350 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 AGTR1P30556 359 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 IDUAP35475 653 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 MSX2P35548 267 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 CPOXP36551 454 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ASCL1P50553 236 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 CDH12P55289 794 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 CTBP2P56545 445 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 FOXD4Q12950 439 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 CEACAM7Q14002 265 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 GUSBP1Q15486 140 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 OR7A5Q15622 319 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ENTPD8Q5MY95 495 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 C1orf140Q5VVS0 124 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 DEF8Q6ZN54 512 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 RINLQ6ZS11 566 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 FAM214BQ7L5A3 538 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 VTCN1Q7Z7D3 282 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 TSPYL5Q86VY4 417 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 CCDC103Q8IW40 242 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 TUSC5Q8IXB3 177 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 RBM15BQ8NDT2 890 aaKnown RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 DNAJA4Q8WW22 397 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 FAM162AQ96A26 154 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF775Q96BV0 537 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 STARD4Q96DR4 205 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ZHX1-C8orf76Q96EF9 292 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 GMPPAQ96IJ6 420 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ZNF300Q96RE9 604 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-222ENST00000478095 C12orf49Q9H741 205 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 CHST11Q9NPF2 352 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 ADPRHL2Q9NX46 363 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 SELENONQ9NZV5 590 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 SLC9A8Q9Y2E8 581 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 EMC9Q9Y3B6 208 aa9.16□□□□□ -0.94
HDAC6-222ENST00000478095 PCNX3Q9H6A9 2034 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 LIPT2A6NK58 231 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 FMO6PO60774 539 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 NPIPB7O75200 414 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 PRKD3O94806 890 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 AKR7A3O95154 331 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 AHSA1O95433 338 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 THY1P04216 161 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 CRHP06850 196 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 T-ENOLP0DO92 83 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 GGT1P19440 569 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 CALB2P22676 271 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 CBLP22681 906 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 FKBP2P26885 142 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 RPS5P46782 204 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 CLK1P49759 484 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 MNAT1P51948 309 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 MAP2K6P52564 334 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 SELENOWP63302 87 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 EGR4Q05215 589 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 RASGEF1BQ0VAM2 473 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 RNPS1Q15287 305 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 EXOC3L2Q2M3D2 409 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 GTF2IRD2BQ6EKJ0 949 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 ABLIM2Q6H8Q1 611 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 GLYATQ6IB77 296 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 ULK3Q6PHR2 472 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 C6orf89Q6UWU4 347 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 WDR88Q6ZMY6 472 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 MEX3BQ6ZN04 569 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 TRPM8Q7Z2W7 1104 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 GTF2IRD2Q86UP8 949 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 OR6K3Q8NGY3 331 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 ADAMTS16Q8TE57 1224 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 SLC25A36Q96CQ1 311 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 KTI12Q96EK9 354 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 SLC47A1Q96FL8 570 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 HSH2DQ96JZ2 352 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 PSD2Q9BQI7 771 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 PTDSS2Q9BVG9 487 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 RBM24Q9BX46 236 aaKnown RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 TAPBPLQ9BX59 468 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 POTEKPQ9BYX7 375 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 PIGMQ9H3S5 423 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 EVA1AQ9H8M9 152 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 NDE1Q9NXR1 346 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 GALNT8Q9NY28 637 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 JKAMPQ9P055 326 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 ING1Q9UK53 422 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 SLC7A7Q9UM01 511 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 PROCRQ9UNN8 238 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 V9GYQ6 96 aa9.15□□□□□ -0.94
HDAC6-222ENST00000478095 NCOA6Q14686 2063 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-222ENST00000478095 PTPN13Q12923 2485 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 A0A087WUJ7 227 aa9.14□□□□□ -0.95
HDAC6-222ENST00000478095 KPNA4O00629 521 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms