RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 NRARPQ7Z6K4 114 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 LHFPL3Q86UP9 236 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 MEX3DQ86XN8 651 aaKnown RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 CDK20Q8IZL9 346 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 RDH10Q8IZV5 341 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ACBD7Q8N6N7 88 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ARIH2OSQ8N7S6 290 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ATP6V1C2Q8NEY4 427 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 OR4F15Q8NGB8 312 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 FANK1Q8TC84 345 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM255BQ8WV15 326 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 DNAJA4Q8WW22 397 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM239Q8WW34 195 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 SPRYD4Q8WW59 207 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ACOT12Q8WYK0 555 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 FGF14Q92915 247 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM203Q969S6 136 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TSACCQ96A04 125 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 RERGQ96A58 199 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ZG16BQ96DA0 208 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF486Q96H40 463 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 BMFQ96LC9 184 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 SAMD8Q96LT4 415 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 HS6ST2Q96MM7 605 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 SECISBP2Q96T21 854 aaKnown RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 CD180Q99467 661 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 PRSS27Q9BQR3 290 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF559Q9BR84 538 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ORAI3Q9BRQ5 295 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF649Q9BS31 505 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 OR2B2Q9GZK3 357 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 KCNN2Q9H2S1 579 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 OR52D1Q9H346 318 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 UBQLN3Q9H347 655 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TPK1Q9H3S4 243 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 IL21RQ9HBE5 538 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM27Q9HBJ8 222 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TIGARQ9NQ88 270 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 HINT3Q9NQE9 182 aaKnown RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 POT1Q9NUX5 634 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF223Q9UK11 482 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 PILRAQ9UKJ1 303 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 CBLCQ9ULV8 474 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 SLC7A7Q9UM01 511 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 NTNG1Q9Y2I2 539 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 YARS2Q9Y2Z4 477 aaKnown RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 HS3ST3A1Q9Y663 406 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 NUP210LQ5VU65 1888 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 COL5A1P20908 1838 aaPredicted RBP4.55□□□□□ -1.68
SF3B6-202ENST00000478050 MPDZO75970 2070 aa4.55□□□□□ -1.68
SF3B6-202ENST00000478050 TP53BP1Q12888 1972 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 NOTCH2Q04721 2471 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 KIR2DS5A0A0G2JLQ3 304 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 A0A0G2JNG1 304 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 MEIOCA2RUB1 952 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CDHR4A6H8M9 788 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 OR6C74A6NCV1 312 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 C12orf71A8MTZ7 269 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 H0YGG7 62 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 J3QRE1 110 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 KIR2DS3K7RE56 304 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GTPBP1O00178 669 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 BHLHE40O14503 412 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SOCS6O14544 535 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SCAMP1O15126 338 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 LINC01565O15544 149 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RNF13O43567 381 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CHP2O43745 196 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 IDH3BO43837 385 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SSX4O60224 188 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GALR3O60755 368 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CTSVO60911 334 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TRIM3O75382 744 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 NKX2-2O95096 273 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 APOL3O95236 402 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 LYPD3O95274 346 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CH25HO95992 272 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 LALBAP00709 142 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 EGFP01133 1207 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TNFP01375 233 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 IFNGP01579 166 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 MT-ND5P03915 603 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 PRKAR1AP10644 381 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 IFI30P13284 250 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CELP19835 753 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 DRD1P21728 446 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 HTR2AP28223 471 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 HOXD12P35452 270 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CD79BP40259 229 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 MAP3K8P41279 467 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RBM34P42696 430 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RABIFP47224 123 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CTBP2P56545 445 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RAB38P57729 211 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ARF3P61204 181 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SKP1P63208 163 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 UBE2IP63279 158 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ACTC1P68032 377 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ACTA1P68133 377 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms