RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 LSRQ86X29 649 aaPredicted RBP9.52□□□□□ -0.89
SEC13-214ENST00000476597 FUNDC1Q8IVP5 155 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 UBE2J2Q8N2K1 259 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SMAP2Q8WU79 429 aaPredicted RBP9.52□□□□□ -0.89
SEC13-214ENST00000476597 NEUROG1Q92886 237 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 TMEM19Q96HH6 336 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 ATP6V1G3Q96LB4 118 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 MUS81Q96NY9 551 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 CCDC28BQ9BUN5 200 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SPATA9Q9BWV2 254 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 TRIM2Q9C040 744 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 BCL2L10Q9HD36 194 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SLCO1B3Q9NPD5 702 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 SLC52A3Q9NQ40 469 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 TCF7L2Q9NQB0 619 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 PARPBPQ9NWS1 579 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 ASB6Q9NWX5 421 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 ZNF443Q9Y2A4 671 aaPredicted RBP9.52□□□□□ -0.89
SEC13-214ENST00000476597 FLVCR1Q9Y5Y0 555 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 USF3Q68DE3 2245 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 ABCA2Q9BZC7 2435 aa9.52□□□□□ -0.89
SEC13-214ENST00000476597 A0A096LPI6 279 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 CIB4A0PJX0 185 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 TMEM247A6NEH6 219 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 TRIM64A6NGJ6 449 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 TRIM64BA6NI03 449 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 LIPT2A6NK58 231 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 PDLIM1O00151 329 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 POLR3GO15318 223 aaPredicted RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 LY6G6DO95868 133 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 HEXAP06865 529 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 PRG2P13727 222 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 IDUAP35475 653 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 FOXG1P55316 489 aaPredicted RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 RPS4XP62701 263 aaKnown RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 FADDQ13158 208 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 CEACAM7Q14002 265 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 LARS2Q15031 903 aaKnown RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 RPS26P11Q5JNZ5 115 aaPredicted RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 LRIF1Q5T3J3 769 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 PRAMEF8Q5VWM4 474 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 PRAMEF7Q5VXH5 474 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 Q71RC1 249 aaPredicted RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 ZIC4Q8N9L1 334 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 KBTBD8Q8NFY9 601 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 LRRC8CQ8TDW0 803 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 FBXW5Q969U6 566 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 EBF4Q9BQW3 602 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 RAD21L1Q9H4I0 556 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 ARMC7Q9H6L4 198 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 A4GALTQ9NPC4 353 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 SLC25A37Q9NYZ2 338 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
SEC13-214ENST00000476597 NPAP1Q9NZP6 1156 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 SLAMF8Q9P0V8 285 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 MALT1Q9UDY8 824 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 SLC9A8Q9Y2E8 581 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 IFT52Q9Y366 437 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 SLC25A15Q9Y619 301 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 FREM1Q5H8C1 2179 aa9.51□□□□□ -0.89
SEC13-214ENST00000476597 ANK3Q12955 4377 aaKnown RBP9.5□□□□□ -0.89
SEC13-214ENST00000476597 CCT8L1PA6NM43 557 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 A8MVM7 634 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 SHISA9B4DS77 424 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 NPIPB7O75200 414 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 RAD51DO75771 328 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 CD8AP01732 235 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 GPIP06744 558 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 ITGA5P08648 1049 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 AQP5P55064 265 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 ATP5J2P56134 94 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 STX1BP61266 288 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 FAPQ12884 760 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 BNIP2Q12982 314 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 OR7A5Q15622 319 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 GABRA6Q16445 453 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 PGGHGQ32M88 737 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 TTMPQ5BVD1 217 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 ZNF311Q5JNZ3 666 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 OTUD3Q5T2D3 398 aaPredicted RBP9.5□□□□□ -0.89
SEC13-214ENST00000476597 TSPO2Q5TGU0 170 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 OR7E24Q6IFN5 339 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 SERPINA11Q86U17 422 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 MSRB3Q8IXL7 192 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 CADM2Q8N3J6 435 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 TMEM99Q8N816 258 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 OR52E4Q8NGH9 312 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 MAL2Q969L2 176 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 SLC35B4Q969S0 331 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 TMEM45BQ96B21 275 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 C3orf49Q96BT1 292 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 RADILQ96JH8 1075 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 SF3B5Q9BWJ5 86 aaKnown RBP9.5□□□□□ -0.89
SEC13-214ENST00000476597 RSPO3Q9BXY4 272 aaPredicted RBP9.5□□□□□ -0.89
SEC13-214ENST00000476597 PIF1Q9H611 641 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 SLC7A10Q9NS82 523 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 TMEM45AQ9NWC5 275 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 TAS2R16Q9NYV7 291 aa9.5□□□□□ -0.89
SEC13-214ENST00000476597 DCTN4Q9UJW0 460 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms