RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 DEC1Q9P2X7 70 aa2.41□□□□□ -2.02
LTN1-204ENST00000475344 TBK1Q9UHD2 729 aa2.41□□□□□ -2.02
LTN1-204ENST00000475344 OR10H1Q9Y4A9 318 aa2.41□□□□□ -2.02
LTN1-204ENST00000475344 MAD1L1Q9Y6D9 718 aa2.41□□□□□ -2.02
LTN1-204ENST00000475344 E7ESA3 106 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 NDC80O14777 642 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 ZSCAN12O43309 604 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TPST2O60704 377 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 SMPD2O60906 423 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 PEX11AO75192 247 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 ADCY5O95622 1261 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 MBD3O95983 291 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 F10P00742 488 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 IFNB1P01574 187 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TSPY4P0CV99 314 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TSPY10P0CW01 314 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 PNMA6AP0CW24 399 aaPredicted RBP2.4□□□□□ -2.03
LTN1-204ENST00000475344 RBMY1CP0DJD4 496 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 ATP6V1B2P21281 511 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 YWHABP31946 246 aaKnown RBP2.4□□□□□ -2.03
LTN1-204ENST00000475344 OTX2P32243 289 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TFPI2P48307 235 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 BIDP55957 195 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TAS2R19P59542 299 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 KPRPQ5T749 579 aaPredicted RBP2.4□□□□□ -2.03
LTN1-204ENST00000475344 C6orf120Q7Z4R8 191 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 MFSD6LQ8IWD5 586 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 SVOPLQ8N434 492 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TCTEX1D2Q8WW35 142 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 MRPS31Q92665 395 aaKnown RBP2.4□□□□□ -2.03
LTN1-204ENST00000475344 SYAP1Q96A49 352 aaPredicted RBP2.4□□□□□ -2.03
LTN1-204ENST00000475344 C4orf36Q96KX1 117 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TSNARE1Q96NA8 513 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 TUBGCP2Q9BSJ2 902 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 GNG12Q9UBI6 72 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 WARS2Q9UGM6 360 aaKnown RBP2.4□□□□□ -2.03
LTN1-204ENST00000475344 KIF25Q9UIL4 384 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 RASD1Q9Y272 281 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 ALG6Q9Y672 507 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 AP1M2Q9Y6Q5 423 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 KIF16BQ96L93 1317 aa2.4□□□□□ -2.03
LTN1-204ENST00000475344 IGHV3OR16-13A0A075B7E8 117 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 OR1F1O43749 312 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 BCAS1O75363 584 aaPredicted RBP2.39□□□□□ -2.03
LTN1-204ENST00000475344 GNA14O95837 355 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 MRPL3P09001 348 aaKnown RBP2.39□□□□□ -2.03
LTN1-204ENST00000475344 EPB41P11171 864 aaKnown RBP2.39□□□□□ -2.03
LTN1-204ENST00000475344 KRT13P13646 458 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 CYP2B6P20813 491 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 UQCRC2P22695 453 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 SOX6P35712 828 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 POLR2FP61218 127 aaKnown RBP2.39□□□□□ -2.03
LTN1-204ENST00000475344 NUCB2P80303 420 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 EWSR1Q01844 656 aaKnown RBP eCLIP2.39□□□□□ -2.03
LTN1-204ENST00000475344 ATL3Q6DD88 541 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 SLC25A34Q6PIV7 304 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 BLOC1S2Q6QNY1 142 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 ACOT7LQ6ZUV0 252 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 TPRA1Q86W33 373 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 GRAMD2AQ8IUY3 354 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 ZNF615Q8N8J6 731 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 NKAPP1Q8N9T2 125 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 SYT14Q8NB59 555 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 DENND6BQ8NEG7 585 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 FAM3CQ92520 227 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 THRSPQ92748 146 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 SH3YL1Q96HL8 342 aaPredicted RBP2.39□□□□□ -2.03
LTN1-204ENST00000475344 C12orf66Q96MD2 445 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 SLC35A5Q9BS91 424 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 VCPKMTQ9H867 229 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 MRPS7Q9Y2R9 242 aaKnown RBP2.39□□□□□ -2.03
LTN1-204ENST00000475344 ATP6V0A2Q9Y487 856 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 PDS5BQ9NTI5 1447 aa2.39□□□□□ -2.03
LTN1-204ENST00000475344 DOCK9Q9BZ29 2069 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 MBLAC1A4D2B0 266 aaPredicted RBP2.38□□□□□ -2.03
LTN1-204ENST00000475344 HCRTR1O43613 425 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 RETP07949 1114 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 CHTF8P0CG12 524 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 HSPA5P11021 654 aaKnown RBP2.38□□□□□ -2.03
LTN1-204ENST00000475344 DRD5P21918 477 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 CHI3L1P36222 383 aaPredicted RBP2.38□□□□□ -2.03
LTN1-204ENST00000475344 PPT1P50897 306 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 HSD17B7P56937 341 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 PJVKQ0ZLH3 352 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 SELPLGQ14242 412 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 GDPD3Q7L5L3 318 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 MOB3BQ86TA1 216 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 ZDHHC21Q8IVQ6 265 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 UBE2Q2Q8WVN8 375 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 RLN3Q8WXF3 142 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 RAPGEF5Q92565 580 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 NDRG1Q92597 394 aaKnown RBP2.38□□□□□ -2.03
LTN1-204ENST00000475344 DTNBP1Q96EV8 351 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 SENP8Q96LD8 212 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 ZNF578Q96N58 590 aaPredicted RBP2.38□□□□□ -2.03
LTN1-204ENST00000475344 RIT2Q99578 217 aa2.38□□□□□ -2.03
LTN1-204ENST00000475344 RIOK1Q9BRS2 568 aaKnown RBP2.38□□□□□ -2.03
LTN1-204ENST00000475344 NIPSNAP3BQ9BS92 247 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms