RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 RELL2Q8NC24 303 aaPredicted RBP12□□□□□ -0.49
CCNL1-216ENST00000475298 NUP43Q8NFH3 380 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 PTDSS2Q9BVG9 487 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 RAB11FIP5Q9BXF6 653 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 SLC38A1Q9H2H9 487 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 BARX1Q9HBU1 254 aaPredicted RBP12□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF275Q9NSD4 429 aaPredicted RBP12□□□□□ -0.49
CCNL1-216ENST00000475298 SEMA4GQ9NTN9 838 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 GPN3Q9UHW5 284 aaPredicted RBP12□□□□□ -0.49
CCNL1-216ENST00000475298 RASD1Q9Y272 281 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 EXOSC1Q9Y3B2 195 aaKnown RBP12□□□□□ -0.49
CCNL1-216ENST00000475298 SLC22A7Q9Y694 548 aa12□□□□□ -0.49
CCNL1-216ENST00000475298 GPR31O00270 319 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ARPC5O15511 151 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 DNAJB6O75190 326 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 OR2A4O95047 310 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 SMIM6P0DI80 62 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 CSNK2A2P19784 350 aaPredicted RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 TRHRP34981 398 aaPredicted RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 SLC1A3P43003 542 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 VEGFCP49767 419 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 MMP15P51511 669 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ADPRHP54922 357 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 OR10A3P58181 314 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 TAS2R41P59536 307 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 FZD5Q13467 585 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 PAN3Q58A45 887 aaKnown RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 C1orf94Q6P1W5 598 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 FAM111BQ6SJ93 734 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 GSG1LQ6UXU4 331 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 OR4N5Q8IXE1 308 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 GNPDA2Q8TDQ7 276 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 COL26A1Q96A83 441 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ELP4Q96EB1 424 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 OR2A7Q96R45 310 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF649Q9BS31 505 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ASB6Q9NWX5 421 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 OR2W5A6NFC9 320 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 EFCAB7A8K855 629 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 CACNB4O00305 520 aaPredicted RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 PLRG1O43660 514 aaKnown RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 HIST1H2ABP04908 130 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF888P0CJ79 500 aaPredicted RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 COL9A1P20849 921 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 AHRP35869 848 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 MTNR1BP49286 362 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 RAP2BP61225 183 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 SNTB2Q13425 540 aaKnown RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ITPRIPL2Q3MIP1 535 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 MINDY4Q4G0A6 757 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 TMEM196Q5HYL7 178 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF425Q6IV72 752 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 NHLRC1Q6VVB1 395 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 HIST3H2AQ7L7L0 130 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 VN1R4Q7Z5H5 301 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 SLITRK4Q8IW52 837 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 PUSL1Q8N0Z8 303 aaKnown RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 FAM71CQ8NEG0 241 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 PXT1Q8NFP0 134 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 OR56A1Q8NGH5 318 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 SFXN5Q8TD22 340 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 HAVCR2Q8TDQ0 301 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 LCN9Q8WX39 176 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 HIST1H2ACQ93077 130 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 FAM46AQ96IP4 442 aaKnown RBP11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ZNF681Q96N22 645 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 PBX4Q9BYU1 374 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 ARL6Q9H0F7 186 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 TMEM74BQ9NUR3 256 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 DCAF16Q9NXF7 216 aa11.99□□□□□ -0.49
CCNL1-216ENST00000475298 A0A0G2JPF8 293 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PRSS38A1L453 326 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 HNRNPCL3B7ZW38 293 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 ST8SIA5O15466 376 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PRODHO43272 600 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 EMC8O43402 210 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 CH25HO95992 272 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 HNRNPCL4P0DMR1 293 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 TEAD1P28347 426 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 CMPK1P30085 196 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 MTNR1AP48039 350 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 RNF144AP50876 292 aaPredicted RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PDX1P52945 283 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 CDK5Q00535 292 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 TNFRSF17Q02223 184 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 MTFR2Q6P444 385 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 HAGHLQ6PII5 290 aaPredicted RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 MFSD9Q8NBP5 474 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 ZCCHC10Q8TBK6 192 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 NARS2Q96I59 477 aaKnown RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 C7orf50Q9BRJ6 194 aaKnown RBP11.98□□□□□ -0.49
CCNL1-216ENST00000475298 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 PINK1Q9BXM7 581 aa11.98□□□□□ -0.49
CCNL1-216ENST00000475298 FN3KQ9H479 309 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms