RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 XKP51811 444 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CDH12P55289 794 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 DLX5P56178 289 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ACY1Q03154 408 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 HNF4GQ14541 408 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ZIC1Q15915 447 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PHF19Q5T6S3 580 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 LINC01590Q5TEZ4 76 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 FBXW9Q5XUX1 488 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 C11orf87Q6NUJ2 197 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OGFOD3Q6PK18 319 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MAMDC2Q7Z304 686 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 MILR1Q7Z6M3 343 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SCN4BQ8IWT1 228 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MICALL2Q8IY33 904 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MMP21Q8N119 569 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 BBS1Q8NFJ9 593 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR4K5Q8NGD3 323 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR14C36Q8NHC7 312 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CACNG6Q9BXT2 260 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 NMES1Q9C002 83 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SLC38A1Q9H2H9 487 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 TMPRSS5Q9H3S3 457 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 DBNDD1Q9H9R9 158 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PRMT8Q9NR22 394 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 DDIT4Q9NX09 232 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CHRNA9Q9UGM1 479 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 LRFN2Q9ULH4 789 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 A0A0A6YYC8 382 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 A0A0A6YYD5 115 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 TMEM269A0A1B0GVZ9 245 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CPED1A4D0V7 1026 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 I3L1I5 382 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 CDC42EP2O14613 210 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MSTNO14793 375 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 INSIG1O15503 277 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 XRCC3O43542 346 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RP2O75695 350 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 KDM4BO94953 1096 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 AP2A2O94973 939 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MT-ND4LP03901 98 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 EPHX1P07099 455 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 C8GP07360 202 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 NDUFB7P17568 137 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 GSTM3P21266 225 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 THPOP40225 353 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 GCGRP47871 477 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ADPRHP54922 357 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ZXDBP98169 803 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PITPNAQ00169 270 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CDC42EP1Q00587 391 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 MC2RQ01718 297 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 PPA1Q15181 289 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 RNPS1Q15287 305 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 PLEKHN1Q494U1 663 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 FBXO48Q5FWF7 155 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 IER5LQ5T953 404 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 CNKSR3Q6P9H4 555 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ASCL4Q6XD76 172 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SLC25A42Q86VD7 318 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 LSRQ86X29 649 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 ODF3L1Q8IXM7 274 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 HDDC3Q8N4P3 179 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ARHGEF39Q8N4T4 335 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 C12orf45Q8N5I9 185 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 RFLNBQ8N5W9 214 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 TRAM1L1Q8N609 369 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 OR5W2Q8NH69 310 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 NFKBIDQ8NI38 313 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 NANPQ8TBE9 248 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 TRMT10AQ8TBZ6 339 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 SFXN5Q8TD22 340 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 POF1BQ8WVV4 589 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 SLC5A11Q8WWX8 675 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 AUTS2Q8WXX7 1259 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ESAMQ96AP7 390 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ELMOD3Q96FG2 381 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 DERL3Q96Q80 235 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 ELF4Q99607 663 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 LMAN2LQ9H0V9 348 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 EPHX3Q9H6B9 360 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 TMEM138Q9NPI0 162 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 HINT3Q9NQE9 182 aaKnown RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 SLC22A11Q9NSA0 550 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 AURKAIP1Q9NWT8 199 aaPredicted RBP3.75□□□□□ -1.81
USP16-205ENST00000474835 TMEM161AQ9NX61 479 aa3.75□□□□□ -1.81
USP16-205ENST00000474835 LOC105369274A0A096LPK9 316 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 OR6C75A6NL08 312 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FAM183AA6NL82 134 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SPINT1O43278 529 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FMO6PO60774 539 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FBXO24O75426 580 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 C6orf47O95873 294 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FSTP19883 344 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 CCR1P32246 355 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FEN1P39748 380 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 MAP3K7CLP57077 242 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 RBX1P62877 108 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 CDK6Q00534 326 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 LGALS3BPQ08380 585 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms