RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SMARCD3Q6STE5 483 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF786Q8N393 782 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM156Q8N614 296 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 LRRC75AQ8NAA5 344 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ELOA3Q8NG57 546 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 OR2T33Q8NG76 320 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 OR4Q3Q8NH05 313 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF563Q8TA94 476 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 POC1BQ8TC44 478 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ZCCHC14Q8WYQ9 949 aaKnown RBP5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ZBTB8AQ96BR9 441 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 NXPE2Q96DL1 559 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 SGTBQ96EQ0 304 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 C1GALT1C1Q96EU7 318 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 SH3YL1Q96HL8 342 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-207ENST00000474825 THOC3Q96J01 351 aaKnown RBP5.99□□□□□ -1.45
ATG4A-207ENST00000474825 DDOQ99489 341 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 PTDSS2Q9BVG9 487 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 MRPS26Q9BYN8 205 aaKnown RBP5.99□□□□□ -1.45
ATG4A-207ENST00000474825 POTEKPQ9BYX7 375 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 DPH1Q9BZG8 443 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ENKD1Q9H0I2 346 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 OR52D1Q9H346 318 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 UBQLN3Q9H347 655 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 FN3KQ9H479 309 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 CCDC86Q9H6F5 360 aaKnown RBP5.99□□□□□ -1.45
ATG4A-207ENST00000474825 EGLN3Q9H6Z9 239 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 METTL7AQ9H8H3 244 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 FKRPQ9H9S5 495 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 MCCC2Q9HCC0 563 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 FANCFQ9NPI8 374 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 KLRF1Q9NZS2 232 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 MED11Q9P086 117 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 TEKT2Q9UIF3 430 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 PSORS1C1Q9UIG5 152 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 SCOCQ9UIL1 159 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF229Q9UJW7 825 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 BAIAP2Q9UQB8 552 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 HIF3AQ9Y2N7 669 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 TMED7Q9Y3B3 224 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 CELSR3Q9NYQ7 3312 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 LOC400499M0QZD8 3231 aa5.99□□□□□ -1.45
ATG4A-207ENST00000474825 HEATR5AQ86XA9 2040 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 A0A087WXM4 84 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM72A0PK05 275 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 NPIPB13A6NJU9 1138 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 KDM4EB2RXH2 506 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 NPIPB4C9JG80 1138 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 H3BN98 237 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 IMPA2O14732 288 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 SURF4O15260 269 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 NKX2-8O15522 239 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 EFSO43281 561 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 IDH3BO43837 385 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 OR2T1O43869 369 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 EFNA2O43921 213 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PRKYO43930 277 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ZIC3O60481 467 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CBR3O75828 277 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TXNDC12O95881 172 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 HMGN1P05114 100 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 HTR1AP08908 422 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PIPP12273 146 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PEPDP12955 493 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF17P17021 662 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 JUNBP17275 347 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 BMP7P18075 431 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 FUT1P19526 365 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CNR1P21554 472 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CXCR1P25024 350 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ACVR2AP27037 513 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CD96P40200 585 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ALDH3B2P48448 385 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CYB561P49447 251 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CCR4P51679 360 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 RRADP55042 308 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 DSCR4P56555 118 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 PRPS1P60891 318 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 IL1RL1Q01638 556 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ZP4Q12836 540 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TUBA3CQ13748 450 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 INPP5JQ15735 1006 aaPredicted RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 HYAL4Q2M3T9 481 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 FAM69AQ5T7M9 428 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 AADACL4Q5VUY2 407 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 MEDAGQ5VYS4 303 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 RNLSQ5VYX0 342 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TMEM154Q6P9G4 183 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 TUBA3EQ6PEY2 450 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ZNF773Q6PK81 442 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 ARSKQ6UWY0 536 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CASP12Q6UXS9 341 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 NHLRC1Q6VVB1 395 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 DPY19L2P2Q6ZN68 376 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 MDGA2Q7Z553 956 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 OAFQ86UD1 273 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 MEX3DQ86XN8 651 aaKnown RBP5.98□□□□□ -1.45
ATG4A-207ENST00000474825 CYP4Z2PQ8N1L4 340 aa5.98□□□□□ -1.45
ATG4A-207ENST00000474825 BEST3Q8N1M1 668 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms