RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FAM71CQ8NEG0 241 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 C1orf162Q8NEQ5 155 aaPredicted RBP12.24□□□□□ -0.45
CCDC78-209ENST00000474647 OR4A15Q8NGL6 344 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 RAB8BQ92930 207 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 TUBGCP3Q96CW5 907 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 KCNS3Q9BQ31 491 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 TMEM181Q9P2C4 612 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 DCTN4Q9UJW0 460 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 FLVCR1Q9Y5Y0 555 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 TMED7-TICAM2A0A0A6YYA0 188 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 VWC2LB2RUY7 222 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 PDLIM1O00151 329 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 NDUFS8O00217 210 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 DNPH1O43598 174 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 WNT11O96014 354 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 OR12D1P0DN82 309 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 G6PDP11413 515 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 IDH2P48735 452 aaKnown RBP12.23□□□□□ -0.45
CCDC78-209ENST00000474647 PRPS1P60891 318 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 HPCAP84074 193 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 TGFBR3Q03167 851 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 HIKESHIQ53FT3 197 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 TSPO2Q5TGU0 170 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 ADGRG3Q86Y34 549 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 RIMKLAQ8IXN7 391 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 ARFGAP2Q8N6H7 521 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 XAGE5Q8WWM1 108 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 DDIT4LQ96D03 193 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 PARPBPQ9NWS1 579 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 TMED7Q9Y3B3 224 aa12.23□□□□□ -0.45
CCDC78-209ENST00000474647 IGHV4-61A0A0C4DH41 118 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 CLDN24A6NM45 220 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 AP3D1O14617 1153 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 KLF11O14901 512 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 TGFAP01135 160 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 SLC35A1P78382 337 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 FUT5Q11128 374 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 GPAT3Q53EU6 434 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 LIPNQ5VXI9 398 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 VHLLQ6RSH7 139 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 SPATA19Q7Z5L4 167 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 ANKRD46Q86W74 232 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 ANKRD42Q8N9B4 389 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 ROPN1LQ96C74 230 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 PPP1R36Q96LQ0 422 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 FOXN4Q96NZ1 517 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 NAA11Q9BSU3 229 aaPredicted RBP12.22□□□□□ -0.45
CCDC78-209ENST00000474647 BPESC1Q9GZL8 116 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 NKIRAS1Q9NYS0 192 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 PCDHGB4Q9UN71 923 aa12.22□□□□□ -0.45
CCDC78-209ENST00000474647 TENM1Q9UKZ4 2725 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 LOC390937A0A1W2PQ73 354 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 TMEM72A0PK05 275 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 KRT33AO76009 404 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 CPSF4O95639 269 aaKnown RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 AGR2O95994 175 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 BPGMP07738 259 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 IMPDH2P12268 514 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 FKBP2P26885 142 aaKnown RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 MPGP29372 298 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 CLK1P49759 484 aaKnown RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 KHKP50053 298 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 WDR4P57081 412 aaKnown RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 KCNJ10P78508 379 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 H3F3AP84243 136 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 MAD2L1Q13257 205 aaPredicted RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 SQLEQ14534 574 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 CR1LQ2VPA4 569 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 OTUD3Q5T2D3 398 aaPredicted RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 FRRS1Q6ZNA5 592 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 GPAT4Q86UL3 456 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 MYOZ1Q9NP98 299 aaPredicted RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 NOP53Q9NZM5 478 aaKnown RBP12.21□□□□□ -0.45
CCDC78-209ENST00000474647 ZDHHC2Q9UIJ5 367 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 TRAPPC4Q9Y296 219 aa12.21□□□□□ -0.45
CCDC78-209ENST00000474647 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 RNASET2O00584 256 aaKnown RBP12.2□□□□□ -0.46
CCDC78-209ENST00000474647 BIRC5O15392 142 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 ZNF23P17027 643 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 TACR3P29371 465 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 ARRB2P32121 409 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 CHI3L1P36222 383 aaPredicted RBP12.2□□□□□ -0.46
CCDC78-209ENST00000474647 SERPINF1P36955 418 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 HTR3AP46098 478 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 POLR2HP52434 150 aaKnown RBP12.2□□□□□ -0.46
CCDC78-209ENST00000474647 CLDN8P56748 225 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 SLC17A1Q14916 467 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 HHATQ5VTY9 493 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 AAED1Q7RTV5 226 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 MIPOL1Q8TD10 442 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 MGARPQ8TDB4 240 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 CNOT9Q92600 299 aaKnown RBP12.2□□□□□ -0.46
CCDC78-209ENST00000474647 ZG16BQ96DA0 208 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 SLC38A2Q96QD8 506 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 SOX7Q9BT81 388 aa12.2□□□□□ -0.46
CCDC78-209ENST00000474647 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms