RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 POM121Q96HA1 1249 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 ECSITQ9BQ95 431 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 BDH2Q9BUT1 245 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 SRXN1Q9BYN0 137 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 ESRP2Q9H6T0 727 aaKnown RBP13.46□□□□□ -0.25
VARS-223ENST00000474643 EFCAB1Q9HAE3 211 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 GP6Q9HCN6 339 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 BCL2L10Q9HD36 194 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 RLIMQ9NVW2 624 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 TAGLN3Q9UI15 199 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.25
VARS-223ENST00000474643 CFAP73A6NFT4 308 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 CCT8L1PA6NM43 557 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 AP3D1O14617 1153 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 SMAD7O15105 426 aaKnown RBP13.45□□□□□ -0.26
VARS-223ENST00000474643 SERPINB7O75635 380 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 ETS2P15036 469 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 CALB2P22676 271 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 AQP1P29972 269 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 COPZ1P61923 177 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 CSNK2A1P68400 391 aaPredicted RBP13.45□□□□□ -0.26
VARS-223ENST00000474643 LTBQ06643 244 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 SELPLGQ14242 412 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 STK11Q15831 433 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 ZNF100Q8IYN0 542 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 C10orf111Q8N326 155 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 OR10A6Q8NH74 314 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 RCN3Q96D15 328 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 OR10A4Q9H209 315 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 PIF1Q9H611 641 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 TMEM38AQ9H6F2 299 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 ACER3Q9NUN7 267 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 AP3M1Q9Y2T2 418 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 ACANP16112 2415 aa13.45□□□□□ -0.26
VARS-223ENST00000474643 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
VARS-223ENST00000474643 CDHR4A6H8M9 788 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 H7C1Q1 480 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 SULT2B1O00204 365 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 AIM2O14862 343 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 THBDP07204 575 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 FESP07332 822 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 GKN3PP0CG01 181 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 CCNA2P20248 432 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 APOBEC1P41238 236 aaKnown RBP13.44□□□□□ -0.26
VARS-223ENST00000474643 RAC3P60763 192 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 RBBP4Q09028 425 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 RASGEF1BQ0VAM2 473 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 SLC25A53Q5H9E4 307 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 NANOGP8Q6NSW7 305 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 TFAP2EQ6VUC0 442 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 NUFIP2Q7Z417 695 aaKnown RBP13.44□□□□□ -0.26
VARS-223ENST00000474643 GRINAQ7Z429 371 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 ARPINQ7Z6K5 226 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 CADM2Q8N3J6 435 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 SLC25A43Q8WUT9 341 aaPredicted RBP13.44□□□□□ -0.26
VARS-223ENST00000474643 NSL1Q96IY1 281 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 SMR3AQ99954 134 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 HOPXQ9BPY8 73 aaPredicted RBP13.44□□□□□ -0.26
VARS-223ENST00000474643 USB1Q9BQ65 265 aaKnown RBP13.44□□□□□ -0.26
VARS-223ENST00000474643 NANOGQ9H9S0 305 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 EMC3Q9P0I2 261 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 RNF115Q9Y4L5 304 aa13.44□□□□□ -0.26
VARS-223ENST00000474643 PRORSD1PA6NEY8 169 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 HS3ST1O14792 307 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 ATP5HO75947 161 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 ADAP00813 363 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 CD3EP07766 207 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 HTR3AP46098 478 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 PTH2RP49190 550 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 EPS8Q12929 822 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 P2RY6Q15077 328 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 TSC22D1Q15714 1073 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 SFRP5Q5T4F7 317 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 PRSS57Q6UWY2 283 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 BHLHA15Q7RTS1 189 aaPredicted RBP13.43□□□□□ -0.26
VARS-223ENST00000474643 ARMC8Q8IUR7 673 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 SLC30A8Q8IWU4 369 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 UBE2J2Q8N2K1 259 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 CLIP4Q8N3C7 705 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 OR8J3Q8NGG0 315 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 SLC26A7Q8TE54 656 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 HSD17B8Q92506 261 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 AKAP1Q92667 903 aaKnown RBP eCLIP13.43□□□□□ -0.26
VARS-223ENST00000474643 GTPBP3Q969Y2 492 aaKnown RBP13.43□□□□□ -0.26
VARS-223ENST00000474643 MUCL1Q96DR8 90 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 C1orf21Q9H246 121 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 KAT8Q9H7Z6 458 aaKnown RBP13.43□□□□□ -0.26
VARS-223ENST00000474643 COQ10BQ9H8M1 238 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 CTPS2Q9NRF8 586 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.43□□□□□ -0.26
VARS-223ENST00000474643 RPS6KB2Q9UBS0 482 aa13.43□□□□□ -0.26
VARS-223ENST00000474643 KLF4O43474 513 aa13.42□□□□□ -0.26
VARS-223ENST00000474643 EFNA2O43921 213 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms