RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CPSF4LA6NMK7 179 aaKnown RBP12.27□□□□□ -0.45
USF1-205ENST00000473969 CXCR6O00574 342 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 NME4O00746 187 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 SMAD9O15198 467 aaKnown RBP12.27□□□□□ -0.45
USF1-205ENST00000473969 OR2T1O43869 369 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 CYTIPO60759 359 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 HTR2AP28223 471 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 AGTR1P30556 359 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 KIR2DL3P43628 341 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 GSK3BP49841 420 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 CEACAM7Q14002 265 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 OR7A5Q15622 319 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 CYBRD1Q53TN4 286 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 ZNF613Q6PF04 617 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 COMTD1Q86VU5 262 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 TUSC5Q8IXB3 177 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 PGAM4Q8N0Y7 254 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 FITM2Q8N6M3 262 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 OR6T1Q8NGN1 323 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 SLC38A4Q969I6 547 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 NSL1Q96IY1 281 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 EPYCQ99645 322 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 OPN3Q9H1Y3 402 aaPredicted RBP12.27□□□□□ -0.45
USF1-205ENST00000473969 C12orf49Q9H741 205 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 NPDC1Q9NQX5 325 aaPredicted RBP12.27□□□□□ -0.45
USF1-205ENST00000473969 PLSCR4Q9NRQ2 329 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 ELOVL5Q9NYP7 299 aa12.27□□□□□ -0.45
USF1-205ENST00000473969 C6orf203Q9P0P8 240 aaPredicted RBP12.27□□□□□ -0.45
USF1-205ENST00000473969 TUBAL3A6NHL2 446 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 GPR171O14626 319 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 ZNF682O95780 498 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 IMPDH2P12268 514 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 POU2F1P14859 743 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 SELENOWP63302 87 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 SORDQ00796 357 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 EXOC3L2Q2M3D2 409 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 ENTPD8Q5MY95 495 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 SAMD4BQ5PRF9 694 aaKnown RBP12.26□□□□□ -0.45
USF1-205ENST00000473969 OTUD3Q5T2D3 398 aaPredicted RBP12.26□□□□□ -0.45
USF1-205ENST00000473969 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
USF1-205ENST00000473969 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 PAQR6Q6TCH4 344 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 C6orf89Q6UWU4 347 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 BEND4Q6ZU67 534 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 FKBP9P1Q75LS8 142 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 GALNT5Q7Z7M9 940 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 CARM1Q86X55 608 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 DMRTC2Q8IXT2 367 aaPredicted RBP12.26□□□□□ -0.45
USF1-205ENST00000473969 ZNF610Q8N9Z0 462 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 SLC25A36Q96CQ1 311 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 RSPO3Q9BXY4 272 aaPredicted RBP12.26□□□□□ -0.45
USF1-205ENST00000473969 GALNT8Q9NY28 637 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 ABCD2Q9UBJ2 740 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 NDRG3Q9UGV2 375 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 KIAA1549Q9HCM3 1950 aa12.26□□□□□ -0.45
USF1-205ENST00000473969 DOCK7Q96N67 2140 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 TRAV36DV7A0A075B6V5 113 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 A0A087WUJ7 227 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 A0A0B4J2E0 115 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 A0A1B0GX12 115 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 TRAPPC13A5PLN9 417 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 ZNF724A8MTY0 619 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 B2RBV5 119 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 TMEM229AB2RXF0 380 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 CALB2P22676 271 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 CD79BP40259 229 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 RPS5P46782 204 aaKnown RBP12.25□□□□□ -0.45
USF1-205ENST00000473969 CDH12P55289 794 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 TAS2R41P59536 307 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 SLC25A3Q00325 362 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 MFSD13AQ14CX5 517 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 PDK3Q15120 406 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 TTC33Q6PID6 262 aaPredicted RBP12.25□□□□□ -0.45
USF1-205ENST00000473969 DEF8Q6ZN54 512 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 GDF7Q7Z4P5 450 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 ZNF100Q8IYN0 542 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 C10orf53Q8N6V4 93 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 MFSD8Q8NHS3 518 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 ADAMTS16Q8TE57 1224 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 ZNF775Q96BV0 537 aaPredicted RBP12.25□□□□□ -0.45
USF1-205ENST00000473969 CDRT15Q96T59 188 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 PSD2Q9BQI7 771 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 POLR2J2Q9GZM3 115 aaKnown RBP12.25□□□□□ -0.45
USF1-205ENST00000473969 POLR2J3Q9H1A7 115 aaKnown RBP12.25□□□□□ -0.45
USF1-205ENST00000473969 BCO1Q9HAY6 547 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 KCNN3Q9UGI6 736 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 RPS6KA6Q9UK32 745 aa12.25□□□□□ -0.45
USF1-205ENST00000473969 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
USF1-205ENST00000473969 CASKO14936 926 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 CHP2O43745 196 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 AKR7A3O95154 331 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 VAMP5O95183 116 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 SERPINA1P01009 418 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 CGAP01215 116 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 IGFBP2P18065 325 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 TCN1P20061 433 aaPredicted RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 SSTR2P30874 369 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms