RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 RPLP2P05387 115 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 LINC00032P0C843 101 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 HKR1P10072 659 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CPT2P23786 658 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 GABRA5P31644 462 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 AKT1P31749 480 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TPBGQ13641 420 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CLINT1Q14677 625 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MESTQ5EB52 335 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 XKR7Q5GH72 579 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ELFN2Q5R3F8 820 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 IDNKQ5T6J7 187 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 DPPA4Q7L190 304 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 THOC6Q86W42 341 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 STK40Q8N2I9 435 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 WDTC1Q8N5D0 677 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF614Q8N883 585 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MDGA1Q8NFP4 955 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM216AQ8WUB2 273 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 RGMAQ96B86 450 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 PHF21BQ96EK2 531 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 SENP5Q96HI0 755 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM71F1Q96KD3 344 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 WDR92Q96MX6 357 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TAAR1Q96RJ0 339 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 CLCC1Q96S66 551 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FICDQ9BVA6 458 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FXYD6Q9H0Q3 95 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TUBB1Q9H4B7 451 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TRPV4Q9HBA0 871 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 TLR8Q9NR97 1041 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 MMP26Q9NRE1 261 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM120CQ9NX05 1096 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 RCC2Q9P258 522 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FZD10Q9ULW2 581 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 RPH3ALQ9UNE2 315 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 FZD1Q9UP38 647 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OR10H1Q9Y4A9 318 aa4.73□□□□□ -1.65
TMEM39A-206ENST00000473684 OGG1O15527 345 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FGF16O43320 207 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MED7O43513 233 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 GRAP2O75791 330 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PIAS2O75928 621 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ELK1P19419 428 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 GPD1P21695 349 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 IDSP22304 550 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CYP2F1P24903 491 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ACKR3P25106 362 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MPZP25189 248 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ZNF140P52738 457 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CDH11P55287 796 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TAS2R39P59534 338 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 AP3S2P59780 193 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PITPNAQ00169 270 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 KIAA0141Q14154 515 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CSHL1Q14406 222 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 RAB12Q6IQ22 244 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM180AQ6UWF9 173 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 B3GLCTQ6Y288 498 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 GLDNQ6ZMI3 551 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 Q6ZTK2 550 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM129CQ86XR2 697 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 XYLT1Q86Y38 959 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SIAH3Q8IW03 269 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 GPR65Q8IYL9 337 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SDR9C7Q8NEX9 313 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 DBF4BQ8NFT6 615 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SEMA6DQ8NFY4 1073 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 OR1N1Q8NGS0 311 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 METTL21AQ8WXB1 218 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TFAP2BQ92481 460 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MRPS31Q92665 395 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 DYNLL2Q96FJ2 89 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 LIN37Q96GY3 246 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TGM7Q96PF1 710 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 FUZQ9BT04 418 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SF3B5Q9BWJ5 86 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 COLEC11Q9BWP8 271 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SNHG12Q9BXW3 62 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ACKR4Q9NPB9 350 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 NEU3Q9UQ49 428 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC27A6Q9Y2P4 619 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A087WUJ7 227 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A0A6YYC8 382 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 KANTRA0A1W2PQU2 76 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM238C9JI98 176 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 I3L1I5 382 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 K7EP13 123 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CLIC1O00299 241 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 CDC14BO60729 498 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 MOSPD3O75425 235 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 YIF1AO95070 293 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PRAMEF12O95522 483 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 SOD1P00441 154 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PMP2P02689 132 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 ADRA2AP08913 450 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 TFPIP10646 304 aa4.72□□□□□ -1.65
TMEM39A-206ENST00000473684 PSMB4P28070 264 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms