RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 RBM18Q96H35 190 aaKnown RBP3.39□□□□□ -1.87
CNOT4-209ENST00000473470 TSGA13Q96PP4 275 aa3.39□□□□□ -1.87
CNOT4-209ENST00000473470 C8orf33Q9H7E9 229 aaPredicted RBP3.39□□□□□ -1.87
CNOT4-209ENST00000473470 ESM1Q9NQ30 184 aa3.39□□□□□ -1.87
CNOT4-209ENST00000473470 FAM114A2Q9NRY5 505 aa3.39□□□□□ -1.87
CNOT4-209ENST00000473470 GHRLQ9UBU3 117 aa3.39□□□□□ -1.87
CNOT4-209ENST00000473470 RNF24Q9Y225 148 aa3.39□□□□□ -1.87
CNOT4-209ENST00000473470 RNF115Q9Y4L5 304 aa3.39□□□□□ -1.87
CNOT4-209ENST00000473470 COL1A2P08123 1366 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 PRRC2AP48634 2157 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 A0A087WWV3 80 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 A0A1W2PNU3 283 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 GSTTP1A0A1W2PQM5 241 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 TTC26A0AVF1 554 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 H0YL77 283 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 K7ERI5 159 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 SGK1O00141 431 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 PHOX2AO14813 284 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 TYROBPO43914 113 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 SDC3O75056 442 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 PRAMEF12O95522 483 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 KLF8O95600 359 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 KRTAP1-4P0C5Y4 121 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 NCF1P14598 390 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 AXLP30530 894 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 HPDP32754 393 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 TRPC1P48995 793 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 TRA2BP62995 288 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 CYLC2Q14093 348 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 EIF2B1Q14232 305 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 PRR30Q53SZ7 412 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 CYBRD1Q53TN4 286 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 TMEM41BQ5BJD5 291 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 DNAJC21Q5F1R6 531 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 NHLRC3Q5JS37 347 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 HACD2Q6Y1H2 254 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 CBWD2Q8IUF1 395 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 GCNT2Q8N0V5 402 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 EID2Q8N6I1 236 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 ALLCQ8N6M5 410 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 METTL13Q8N6R0 699 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 GMCL1P1Q8NEA9 526 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 GIPC3Q8TF64 312 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 SYAP1Q96A49 352 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 C11orf24Q96F05 449 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 CNOT6LQ96LI5 555 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 CARD6Q9BX69 1037 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 MRPL13Q9BYD1 178 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 DPH5Q9H2P9 285 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 RNF41Q9H4P4 317 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 COQ10BQ9H8M1 238 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 COG4Q9H9E3 785 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 POLD4Q9HCU8 107 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 DCAF13Q9NV06 445 aaKnown RBP3.38□□□□□ -1.87
CNOT4-209ENST00000473470 ATP6V1HQ9UI12 483 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 KIF3AQ9Y496 699 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 AP1M2Q9Y6Q5 423 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 ABCB11O95342 1321 aa3.38□□□□□ -1.87
CNOT4-209ENST00000473470 CUBNO60494 3623 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 A0A1B0GWJ7 208 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ESYT2A0FGR8 921 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ZNF840PA6NDX5 716 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 I3L4J1 428 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 NDC80O14777 642 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 TM9SF1O15321 606 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 NOL3O60936 208 aaKnown RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 GUCA1CO95843 209 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 KRT8P05787 483 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ANXA4P09525 319 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 WNT2P09544 360 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 THRBP10828 461 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 TNNI3P19429 210 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 HTR5AP47898 357 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ARHGDIAP52565 204 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 RAG2P55895 527 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 EXOSC2Q13868 293 aaKnown RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 RFTN1Q14699 578 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 PSMD5Q16401 504 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 DCAF4L1Q3SXM0 396 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 BEND6Q5SZJ8 279 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 LEMD1Q68G75 181 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 TWF2Q6IBS0 349 aaKnown RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 NIPAL3Q6P499 406 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ZNF573Q86YE8 665 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 OR5AU1Q8NGC0 362 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 OR52J3Q8NH60 311 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ITLN1Q8WWA0 313 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 VSTM2LQ96N03 204 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 VPS35Q96QK1 796 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 CCNL2Q96S94 520 aaPredicted RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 LPAR2Q9HBW0 351 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 ASCL3Q9NQ33 180 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 SLC35D1Q9NTN3 355 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 DUS2Q9NX74 493 aaKnown RBP3.37□□□□□ -1.87
CNOT4-209ENST00000473470 SENP1Q9P0U3 644 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 GALPQ9UBC7 116 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 B9D1Q9UPM9 204 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 RNF6Q9Y252 685 aa3.37□□□□□ -1.87
CNOT4-209ENST00000473470 EXOSC1Q9Y3B2 195 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms