RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 UGT2B4P06133 528 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 CHTF8P0CG12 524 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 OPN1MW2P0DN77 364 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 OPN1MW3P0DN78 364 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 COX5AP20674 150 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 TAS2R19P59542 299 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 NRF1Q16656 503 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 TMIGD1Q6UXZ0 262 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 Q8N9W7 124 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 ARPC1AQ92747 370 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 SYAP1Q96A49 352 aaPredicted RBP3.54□□□□□ -1.84
CLK1-209ENST00000472679 PAGE5Q96GU1 130 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 CHRDL1Q9BU40 450 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 MYOZ2Q9NPC6 264 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 RNF14Q9UBS8 474 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 TRAF3IP3Q9Y228 551 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 MRPS33Q9Y291 106 aaKnown RBP3.54□□□□□ -1.84
CLK1-209ENST00000472679 ARID1AO14497 2285 aa3.54□□□□□ -1.84
CLK1-209ENST00000472679 TRBV6-6A0A0A6YYG2 114 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 IDSB3KWA1 339 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 ANGPT2O15123 496 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 N4BP1O75113 896 aaKnown RBP3.53□□□□□ -1.84
CLK1-209ENST00000472679 KIAA0754O94854 1291 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 MMP1P03956 469 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 IMPDH1P20839 514 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 GCAP28676 217 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 CALCRP30988 508 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 MAP3K8P41279 467 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 LHX2P50458 406 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 KPNA2P52292 529 aaKnown RBP3.53□□□□□ -1.84
CLK1-209ENST00000472679 MAP2K1Q02750 393 aaPredicted RBP3.53□□□□□ -1.84
CLK1-209ENST00000472679 SLC15A2Q16348 729 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 CCDC80Q76M96 950 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 GDPD3Q7L5L3 318 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 SLC35F2Q8IXU6 374 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 ZNF683Q8IZ20 524 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 OR10G3Q8NGC4 313 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 OR2T3Q8NH03 318 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 BLOC1S5Q8TDH9 187 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 RNF185Q96GF1 192 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 SENP8Q96LD8 212 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 NRIP2Q9BQI9 281 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 TUBGCP2Q9BSJ2 902 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 NAT9Q9BTE0 207 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 RMND5AQ9H871 391 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 PLGRKTQ9HBL7 147 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 HOXC10Q9NYD6 342 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 SH3BGRL2Q9UJC5 107 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 KLK12Q9UKR0 248 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 RPH3ALQ9UNE2 315 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 WSB1Q9Y6I7 421 aa3.53□□□□□ -1.84
CLK1-209ENST00000472679 MBLAC1A4D2B0 266 aaPredicted RBP3.52□□□□□ -1.85
CLK1-209ENST00000472679 METTL21EPA6NDL7 271 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 NOL3O60936 208 aaKnown RBP3.52□□□□□ -1.85
CLK1-209ENST00000472679 DESP17661 470 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 PSMA5P28066 241 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 KIR2DS4P43632 304 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 BEND3Q5T5X7 828 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 TIGD3Q6B0B8 471 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 CTRB2Q6GPI1 263 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 ZNF571Q7Z3V5 609 aaPredicted RBP3.52□□□□□ -1.85
CLK1-209ENST00000472679 PIGCQ92535 297 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 CMTM7Q96FZ5 175 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 TIMD4Q96H15 378 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 SEC22AQ96IW7 307 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 TTC25Q96NG3 672 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 OR2M2Q96R28 347 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 SECISBP2Q96T21 854 aaKnown RBP3.52□□□□□ -1.85
CLK1-209ENST00000472679 C6orf203Q9P0P8 240 aaPredicted RBP3.52□□□□□ -1.85
CLK1-209ENST00000472679 PIPOXQ9P0Z9 390 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 POLDIP2Q9Y2S7 368 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 TIMM10BQ9Y5J6 103 aa3.52□□□□□ -1.85
CLK1-209ENST00000472679 K7EQM0 130 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 HIP1O00291 1037 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 RGS16O15492 202 aaPredicted RBP3.51□□□□□ -1.85
CLK1-209ENST00000472679 GIPP09681 153 aaPredicted RBP3.51□□□□□ -1.85
CLK1-209ENST00000472679 RFC4P35249 363 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 VDAC2P45880 294 aaPredicted RBP3.51□□□□□ -1.85
CLK1-209ENST00000472679 PKNOX1P55347 436 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 SH3BGRP55822 239 aaPredicted RBP3.51□□□□□ -1.85
CLK1-209ENST00000472679 KRTAP10-8P60410 259 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 CARD16Q5EG05 197 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 COX15Q7KZN9 410 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 ZNF429Q86V71 674 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 SLC26A11Q86WA9 606 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 OR6C4Q8NGE1 309 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 OR9G1Q8NH87 305 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 FANK1Q8TC84 345 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 ZNF607Q96SK3 696 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 P2RY13Q9BPV8 354 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 MRPL45Q9BRJ2 306 aaKnown RBP3.51□□□□□ -1.85
CLK1-209ENST00000472679 OR11A1Q9GZK7 315 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 LRRN3Q9H3W5 708 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 RNF167Q9H6Y7 350 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 SCN2AQ99250 2005 aa3.51□□□□□ -1.85
CLK1-209ENST00000472679 MTCL1Q9Y4B5 1905 aaKnown RBP3.5□□□□□ -1.85
CLK1-209ENST00000472679 F5H6K3 240 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms