RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 GPRC5AQ8NFJ5 357 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 OR51S1Q8NGJ8 323 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 OR6K2Q8NGY2 324 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 LKAAEAR1Q8TD35 194 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SMPDL3BQ92485 455 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SLC25A36Q96CQ1 311 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 AKR1E2Q96JD6 320 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NRIP2Q9BQI9 281 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SULT4A1Q9BR01 284 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 TRIM62Q9BVG3 475 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 ASB8Q9H765 288 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 RHOFQ9HBH0 211 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 CRLF2Q9HC73 371 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 PRDM5Q9NQX1 630 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 TMEM248Q9NWD8 314 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SPG21Q9NZD8 308 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NOP16Q9Y3C1 178 aaKnown RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 ARID1BQ8NFD5 2236 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 A0A0B4J2A0 478 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 ARRDC5A6NEK1 342 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 GABARAPH6UMI1 98 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NDUFB6O95139 128 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NFATC1O95644 943 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 HOXC4P09017 264 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 CLTBP09497 229 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SAGP10523 405 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 FOLR2P14207 255 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 AGAP20933 346 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 IGFBP6P24592 240 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 BUD31P41223 144 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 ASMTP46597 345 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 PRKXP51817 358 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 PKIAP61925 76 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 AP1S1P61966 158 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 MC1RQ01726 317 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 PRAMEF17Q5VTA0 474 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 JMJD6Q6NYC1 403 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 UBE2R2Q712K3 238 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 SERPINA9Q86WD7 417 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 CPOQ8IVL8 374 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SCN4BQ8IWT1 228 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 ZBTB2Q8N680 514 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 POGLUT1Q8NBL1 392 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NAXEQ8NCW5 288 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 STEAP2Q8NFT2 490 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 OR7G2Q8NG99 324 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 RNF141Q8WVD5 230 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 VOPP1Q96AW1 172 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 S100A16Q96FQ6 103 aaKnown RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 MED8Q96G25 268 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 BSCL2Q96G97 398 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 ZNF354BQ96LW1 612 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NECAB3Q96P71 396 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 GPR20Q99678 358 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 GPA33Q99795 319 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 MICU1Q9BPX6 476 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NDC1Q9BTX1 674 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 WRAP53Q9BUR4 548 aaKnown RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 MRIQ9BWK5 157 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 MRPL37Q9BZE1 423 aaKnown RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 LMAN2LQ9H0V9 348 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 METTL9Q9H1A3 318 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 CHST8Q9H2A9 424 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 OR51V1Q9H2C8 321 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 RIMS4Q9H426 269 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 RGCCQ9H4X1 137 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 TRPV4Q9HBA0 871 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 LHX9Q9NQ69 397 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SIRT7Q9NRC8 400 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 DUSP22Q9NRW4 184 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 ABRACLQ9P1F3 81 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 NDOR1Q9UHB4 597 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 SHPKQ9UHJ6 478 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 CRLS1Q9UJA2 301 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 ZNF214Q9UL59 606 aaPredicted RBP3.91□□□□□ -1.78
VPS50-210ENST00000471188 ZNF236Q9UL36 1845 aa3.91□□□□□ -1.78
VPS50-210ENST00000471188 ZNF726A6NNF4 738 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RNASEK-C17orf49H0YIS7 233 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PIRO00625 290 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 KIAA0355O15063 1070 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 EIF4E2O60573 245 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 OR2F2O95006 317 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ARIH2O95376 493 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SLC2A10O95528 541 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 RAB3DO95716 219 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 FGF19O95750 216 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 IGHV2-5P01817 119 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SBK2P0C263 348 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 GNSP15586 552 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 HIST1H1BP16401 226 aaKnown RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 RCC1P18754 421 aaPredicted RBP3.9□□□□□ -1.78
VPS50-210ENST00000471188 UQCRC2P22695 453 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 VAMP1P23763 118 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ACKR3P25106 362 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 CD96P40200 585 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 GAS1P54826 345 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 ST8SIA6P61647 398 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 SHC2P98077 582 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 PJVKQ0ZLH3 352 aa3.9□□□□□ -1.78
VPS50-210ENST00000471188 OR2F1Q13607 317 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms