RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ANKRD60Q9BZ19 345 aa8.83□□□□□ -1
CCM2-204ENST00000470837 GRIP2Q9C0E4 1043 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ADNPQ9H2P0 1102 aa8.83□□□□□ -1
CCM2-204ENST00000470837 LDAHQ9H6V9 325 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ZNF229Q9UJW7 825 aa8.83□□□□□ -1
CCM2-204ENST00000470837 HDGFL3Q9Y3E1 203 aa8.83□□□□□ -1
CCM2-204ENST00000470837 CORINQ9Y5Q5 1042 aa8.83□□□□□ -1
CCM2-204ENST00000470837 PCSK5Q92824 1860 aa8.83□□□□□ -1
CCM2-204ENST00000470837 IGKV1D-42A0A075B6H8 117 aa8.82□□□□□ -1
CCM2-204ENST00000470837 TRAV27A0A087WT01 109 aa8.82□□□□□ -1
CCM2-204ENST00000470837 OR2M5A3KFT3 312 aa8.82□□□□□ -1
CCM2-204ENST00000470837 PINLYPA6NC86 204 aa8.82□□□□□ -1
CCM2-204ENST00000470837 BLOC1S5-TXNDC5H3BN57 136 aa8.82□□□□□ -1
CCM2-204ENST00000470837 SLC16A6O15403 523 aa8.82□□□□□ -1
CCM2-204ENST00000470837 DENRO43583 198 aaKnown RBP8.82□□□□□ -1
CCM2-204ENST00000470837 MPZL2O60487 215 aa8.82□□□□□ -1
CCM2-204ENST00000470837 NDUFB2O95178 105 aa8.82□□□□□ -1
CCM2-204ENST00000470837 HMGN1P05114 100 aa8.82□□□□□ -1
CCM2-204ENST00000470837 RFPL3SP0C7P2 107 aa8.82□□□□□ -1
CCM2-204ENST00000470837 ZNF24P17028 368 aa8.82□□□□□ -1
CCM2-204ENST00000470837 POU3F2P20265 443 aaPredicted RBP8.82□□□□□ -1
CCM2-204ENST00000470837 SFTPDP35247 375 aa8.82□□□□□ -1
CCM2-204ENST00000470837 RFC3P40938 356 aa8.82□□□□□ -1
CCM2-204ENST00000470837 OR2B6P58173 313 aa8.82□□□□□ -1
CCM2-204ENST00000470837 RAC1P63000 192 aa8.82□□□□□ -1
CCM2-204ENST00000470837 CSNK2A1P68400 391 aaPredicted RBP8.82□□□□□ -1
CCM2-204ENST00000470837 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
CCM2-204ENST00000470837 FOXO1Q12778 655 aa8.82□□□□□ -1
CCM2-204ENST00000470837 PMS2P3Q13401 168 aa8.82□□□□□ -1
CCM2-204ENST00000470837 PTGES3Q15185 160 aaKnown RBP8.82□□□□□ -1
CCM2-204ENST00000470837 ZNF74Q16587 644 aa8.82□□□□□ -1
CCM2-204ENST00000470837 TMEM176BQ3YBM2 270 aaPredicted RBP8.82□□□□□ -1
CCM2-204ENST00000470837 WIPI1Q5MNZ9 446 aaPredicted RBP8.82□□□□□ -1
CCM2-204ENST00000470837 CLEC12AQ5QGZ9 265 aa8.82□□□□□ -1
CCM2-204ENST00000470837 ASB18Q6ZVZ8 466 aa8.82□□□□□ -1
CCM2-204ENST00000470837 ZFP62Q8NB50 900 aaPredicted RBP8.82□□□□□ -1
CCM2-204ENST00000470837 OR5M1Q8NGP8 315 aa8.82□□□□□ -1
CCM2-204ENST00000470837 OR13C2Q8NGS9 318 aa8.82□□□□□ -1
CCM2-204ENST00000470837 MFSD8Q8NHS3 518 aa8.82□□□□□ -1
CCM2-204ENST00000470837 FAM81AQ8TBF8 368 aa8.82□□□□□ -1
CCM2-204ENST00000470837 EXTL1Q92935 676 aa8.82□□□□□ -1
CCM2-204ENST00000470837 TAAR8Q969N4 342 aa8.82□□□□□ -1
CCM2-204ENST00000470837 NTNG2Q96CW9 530 aa8.82□□□□□ -1
CCM2-204ENST00000470837 HRASLS5Q96KN8 279 aa8.82□□□□□ -1
CCM2-204ENST00000470837 KLHDC3Q9BQ90 382 aa8.82□□□□□ -1
CCM2-204ENST00000470837 IFT27Q9BW83 186 aa8.82□□□□□ -1
CCM2-204ENST00000470837 TSSK6Q9BXA6 273 aa8.82□□□□□ -1
CCM2-204ENST00000470837 OR2B2Q9GZK3 357 aa8.82□□□□□ -1
CCM2-204ENST00000470837 OR11A1Q9GZK7 315 aa8.82□□□□□ -1
CCM2-204ENST00000470837 OR52D1Q9H346 318 aa8.82□□□□□ -1
CCM2-204ENST00000470837 EGLN3Q9H6Z9 239 aa8.82□□□□□ -1
CCM2-204ENST00000470837 TMEM185BQ9H7F4 350 aa8.82□□□□□ -1
CCM2-204ENST00000470837 ZNF703Q9H7S9 590 aaPredicted RBP8.82□□□□□ -1
CCM2-204ENST00000470837 TIGARQ9NQ88 270 aa8.82□□□□□ -1
CCM2-204ENST00000470837 BAIAP2Q9UQB8 552 aa8.82□□□□□ -1
CCM2-204ENST00000470837 HSPE1-MOB4S4R3N1 261 aa8.82□□□□□ -1
CCM2-204ENST00000470837 WDFY3Q8IZQ1 3526 aa8.82□□□□□ -1
CCM2-204ENST00000470837 CEP295Q9C0D2 2601 aa8.81□□□□□ -1
CCM2-204ENST00000470837 MED19A0JLT2 244 aaPredicted RBP8.81□□□□□ -1
CCM2-204ENST00000470837 M0R3G1 203 aa8.81□□□□□ -1
CCM2-204ENST00000470837 SULT2B1O00204 365 aa8.81□□□□□ -1
CCM2-204ENST00000470837 DLGAP1O14490 977 aa8.81□□□□□ -1
CCM2-204ENST00000470837 CDC42EP2O14613 210 aa8.81□□□□□ -1
CCM2-204ENST00000470837 KLF4O43474 513 aa8.81□□□□□ -1
CCM2-204ENST00000470837 RNF13O43567 381 aa8.81□□□□□ -1
CCM2-204ENST00000470837 ZIC3O60481 467 aa8.81□□□□□ -1
CCM2-204ENST00000470837 IFNGP01579 166 aa8.81□□□□□ -1
CCM2-204ENST00000470837 CRYABP02511 175 aaKnown RBP8.81□□□□□ -1
CCM2-204ENST00000470837 HPNP05981 417 aa8.81□□□□□ -1
CCM2-204ENST00000470837 MYF6P23409 242 aa8.81□□□□□ -1
CCM2-204ENST00000470837 AHCYP23526 432 aa8.81□□□□□ -1
CCM2-204ENST00000470837 GGT2P36268 569 aa8.81□□□□□ -1
CCM2-204ENST00000470837 POLR2IP36954 125 aaKnown RBP8.81□□□□□ -1
CCM2-204ENST00000470837 MAGEA5P43359 124 aa8.81□□□□□ -1
CCM2-204ENST00000470837 GIPRP48546 466 aa8.81□□□□□ -1
CCM2-204ENST00000470837 SLC35A1P78382 337 aa8.81□□□□□ -1
CCM2-204ENST00000470837 ADARB1P78563 741 aaKnown RBP8.81□□□□□ -1
CCM2-204ENST00000470837 EGR4Q05215 589 aa8.81□□□□□ -1
CCM2-204ENST00000470837 MYBPHQ13203 477 aa8.81□□□□□ -1
CCM2-204ENST00000470837 GINS1Q14691 196 aa8.81□□□□□ -1
CCM2-204ENST00000470837 PDK3Q15120 406 aa8.81□□□□□ -1
CCM2-204ENST00000470837 OR7A5Q15622 319 aa8.81□□□□□ -1
CCM2-204ENST00000470837 INAQ16352 499 aa8.81□□□□□ -1
CCM2-204ENST00000470837 HYAL4Q2M3T9 481 aa8.81□□□□□ -1
CCM2-204ENST00000470837 CMPK2Q5EBM0 449 aa8.81□□□□□ -1
CCM2-204ENST00000470837 SLC6A19Q695T7 634 aa8.81□□□□□ -1
CCM2-204ENST00000470837 PTCHD4Q6ZW05 846 aa8.81□□□□□ -1
CCM2-204ENST00000470837 CHMP1BQ7LBR1 199 aa8.81□□□□□ -1
CCM2-204ENST00000470837 THAP5Q7Z6K1 395 aa8.81□□□□□ -1
CCM2-204ENST00000470837 MEIOBQ8N635 442 aa8.81□□□□□ -1
CCM2-204ENST00000470837 TMEM251Q8N6I4 163 aa8.81□□□□□ -1
CCM2-204ENST00000470837 OR5J2Q8NH18 312 aa8.81□□□□□ -1
CCM2-204ENST00000470837 C9orf43Q8TAL5 461 aaPredicted RBP8.81□□□□□ -1
CCM2-204ENST00000470837 POC1BQ8TC44 478 aa8.81□□□□□ -1
CCM2-204ENST00000470837 LIPHQ8WWY8 451 aa8.81□□□□□ -1
CCM2-204ENST00000470837 RELTQ969Z4 430 aa8.81□□□□□ -1
CCM2-204ENST00000470837 ABHD17AQ96GS6 310 aa8.81□□□□□ -1
CCM2-204ENST00000470837 SAMD8Q96LT4 415 aa8.81□□□□□ -1
CCM2-204ENST00000470837 KLHL15Q96M94 604 aa8.81□□□□□ -1
CCM2-204ENST00000470837 MUS81Q96NY9 551 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms