RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SLC6A13Q9NSD5 602 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 CBLN4Q9NTU7 201 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 MALT1Q9UDY8 824 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
CPSF4-210ENST00000469897 IGHV4-30-2A0A087WSY4 118 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 PDLIM1O00151 329 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 FAAHO00519 579 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 RFXANKO14593 260 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 HDAC3O15379 428 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 CD5LO43866 347 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 SLC22A3O75751 556 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 AKR7A3O95154 331 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 KRT75O95678 551 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 ETFAP13804 333 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-210ENST00000469897 RPS4Y1P22090 263 aaKnown RBP11.65□□□□□ -0.54
CPSF4-210ENST00000469897 CXCR1P25024 350 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 CRATP43155 626 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 MAP2K6P52564 334 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 NUDT6P53370 316 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.54
CPSF4-210ENST00000469897 LRRC74AQ0VAA2 488 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 BNIP2Q12982 314 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 OR7A5Q15622 319 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 NRF1Q16656 503 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 GSTA3Q16772 222 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 OTUD3Q5T2D3 398 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-210ENST00000469897 NXNQ6DKJ4 435 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 C11orf71Q6IPW1 123 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 AAED1Q7RTV5 226 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 PEX5LQ8IYB4 626 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 FBXL14Q8N1E6 418 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 MUC15Q8N387 334 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 OR52P1PQ8NH57 321 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 MGARPQ8TDB4 240 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 SLC17A5Q9NRA2 495 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 THAP1Q9NVV9 213 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 SLC9A8Q9Y2E8 581 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 DNHD1Q96M86 4753 aa11.65□□□□□ -0.54
CPSF4-210ENST00000469897 NSD1Q96L73 2696 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-210ENST00000469897 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 TRPC5OSA6NMA1 111 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 KLF11O14901 512 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 IL6P05231 212 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 UQCRBP14927 111 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 ACAA2P42765 397 aaKnown RBP11.64□□□□□ -0.55
CPSF4-210ENST00000469897 MVDP53602 400 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 TXNL4AP83876 142 aaKnown RBP11.64□□□□□ -0.55
CPSF4-210ENST00000469897 SLC25A3Q00325 362 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM225Q6GV28 225 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 HMBOX1Q6NT76 420 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 PAQR6Q6TCH4 344 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 CLIP4Q8N3C7 705 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 CADM2Q8N3J6 435 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 GLB1L3Q8NCI6 653 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-210ENST00000469897 OR10H5Q8NGA6 315 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 AURKBQ96GD4 344 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF385AQ96PM9 386 aaKnown RBP11.64□□□□□ -0.55
CPSF4-210ENST00000469897 DCTN4Q9UJW0 460 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 DSCAMO60469 2012 aa11.64□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM120BA0PK00 339 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 CDHR4A6H8M9 788 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 TLX2O43763 284 aaPredicted RBP11.63□□□□□ -0.55
CPSF4-210ENST00000469897 SNNO75324 88 aaPredicted RBP11.63□□□□□ -0.55
CPSF4-210ENST00000469897 ANP32DO95626 131 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 GPIP06744 558 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 TFPTP0C1Z6 253 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 PRG2P13727 222 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 MPGP29372 298 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 PRPS1P60891 318 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 TGFBR3Q03167 851 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 SLC9B1Q4ZJI4 515 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 HIKESHIQ53FT3 197 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 CXXC5Q7LFL8 322 aaKnown RBP11.63□□□□□ -0.55
CPSF4-210ENST00000469897 GPAT4Q86UL3 456 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF440Q8IYI8 595 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 SLC38A5Q8WUX1 472 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 AMBRA1Q9C0C7 1298 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 P2RX2Q9UBL9 471 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF232Q9UNY5 417 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 MOKQ9UQ07 419 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 AMDHD2Q9Y303 409 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 USF3Q68DE3 2245 aa11.63□□□□□ -0.55
CPSF4-210ENST00000469897 ARID1AO14497 2285 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 SLCO1B7G3V0H7 640 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 KRT33AO76009 404 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 BCHEP06276 602 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 IDO1P14902 403 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 APOBEC3AP31941 199 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-210ENST00000469897 DSCR9P59020 149 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 COPZ1P61923 177 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 LGALS3BPQ08380 585 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 GTDC1Q4AE62 458 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 LIN52Q52LA3 116 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 PDCD4Q53EL6 469 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms