RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PAPD5Q8NDF8 572 aaKnown RBP13.25□□□□□ -0.29
COL9A3-209ENST00000469852 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 PRR7Q8TB68 274 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 ZPLD1Q8TCW7 415 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 STK35Q8TDR2 534 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
COL9A3-209ENST00000469852 TRIB1Q96RU8 372 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 FUZQ9BT04 418 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 TMEM43Q9BTV4 400 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
COL9A3-209ENST00000469852 CCM2LQ9NUG4 571 aaPredicted RBP13.25□□□□□ -0.29
COL9A3-209ENST00000469852 CLCF1Q9UBD9 225 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 SEC14L4Q9UDX3 406 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 FAM32AQ9Y421 112 aaKnown RBP13.25□□□□□ -0.29
COL9A3-209ENST00000469852 HIVEP3Q5T1R4 2406 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 COL12A1Q99715 3063 aa13.25□□□□□ -0.29
COL9A3-209ENST00000469852 PHF3Q92576 2039 aaKnown RBP13.24□□□□□ -0.29
COL9A3-209ENST00000469852 A0A087WUU8 490 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 TRBV4-1A0A0J9YWV2 114 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 LIPT2A6NK58 231 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 FIGNL2A6NMB9 653 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 AHRRA9YTQ3 701 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 FTCDNL1E5RQL4 147 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 WDR1O75083 606 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 H1F0P07305 194 aaKnown RBP13.24□□□□□ -0.29
COL9A3-209ENST00000469852 ITGA2P17301 1181 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 CBLP22681 906 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 IDUAP35475 653 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 CLK1P49759 484 aaKnown RBP13.24□□□□□ -0.29
COL9A3-209ENST00000469852 MAP2K6P52564 334 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 CARD18P57730 90 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 TRAM2Q15035 370 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 PON3Q15166 354 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 SEC23BQ15437 767 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 ZNF239Q16600 458 aaKnown RBP13.24□□□□□ -0.29
COL9A3-209ENST00000469852 TTC33Q6PID6 262 aaPredicted RBP13.24□□□□□ -0.29
COL9A3-209ENST00000469852 MEX3DQ86XN8 651 aaKnown RBP13.24□□□□□ -0.29
COL9A3-209ENST00000469852 FNDC9Q8TBE3 224 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 SLC7A13Q8TCU3 470 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 TMEM239Q8WW34 195 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 ROBO4Q8WZ75 1007 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 MOGAT1Q96PD6 335 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 UCN2Q96RP3 112 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 POTEKPQ9BYX7 375 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 STOML1Q9UBI4 398 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 HDGFL3Q9Y3E1 203 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 MED12LQ86YW9 2145 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 DOCK7Q96N67 2140 aa13.24□□□□□ -0.29
COL9A3-209ENST00000469852 FLNCQ14315 2725 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 TRAV36DV7A0A075B6V5 113 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 A0A1W2PRQ8 180 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 SULT2B1O00204 365 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 SMAD9O15198 467 aaKnown RBP13.23□□□□□ -0.29
COL9A3-209ENST00000469852 RAMP1O60894 148 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 TIPRLO75663 272 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 AQP8O94778 261 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 TOXO94900 526 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 PMS2P2O95744 297 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 BGLAPP02818 100 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 GABRA1P14867 456 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 FPR1P21462 350 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 ENPP1P22413 925 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 LIMS1P48059 325 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 OR2B6P58173 313 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 RPS3AP61247 264 aaKnown RBP13.23□□□□□ -0.29
COL9A3-209ENST00000469852 DGCR6Q14129 220 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 OR7A5Q15622 319 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 SGCBQ16585 318 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 FGD3Q5JSP0 725 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 PPP4R4Q6NUP7 873 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 PODNL1Q6PEZ8 512 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 FJX1Q86VR8 437 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 C9orf106Q8NAJ2 232 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 PYDC1Q8WXC3 89 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 POP5Q969H6 163 aaKnown RBP13.23□□□□□ -0.29
COL9A3-209ENST00000469852 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
COL9A3-209ENST00000469852 DMRTA2Q96SC8 542 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 ZNF347Q96SE7 839 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 TTYH2Q9BSA4 534 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 MEMO1Q9Y316 297 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 LYVE1Q9Y5Y7 322 aa13.23□□□□□ -0.29
COL9A3-209ENST00000469852 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 H3BNX3 289 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 LRRTM2O43300 516 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 FZD7O75084 574 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 ENTPD5O75356 428 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 GADD45GO95257 159 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 AHSA1O95433 338 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 CST1P01037 141 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 GLI4P10075 376 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 FUT1P19526 365 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 FKBP2P26885 142 aaKnown RBP13.22□□□□□ -0.29
COL9A3-209ENST00000469852 RBM34P42696 430 aaKnown RBP13.22□□□□□ -0.29
COL9A3-209ENST00000469852 IST1P53990 364 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 NUP107P57740 925 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 RAC3P60763 192 aa13.22□□□□□ -0.29
COL9A3-209ENST00000469852 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms