RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 FZD7O75084 574 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 CIB2O75838 187 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 MT-ATP6P00846 226 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 SEMG1P04279 462 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 FABP3P05413 133 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 ENPP1P22413 925 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 OPRM1P35372 400 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 H3F3AP84243 136 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 PMPCAQ10713 525 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 DGCR6Q14129 220 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 PON3Q15166 354 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 PAQR6Q6TCH4 344 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 CLEC18BQ6UXF7 455 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 CYP2R1Q6VVX0 501 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 P4HA3Q7Z4N8 544 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 GDF7Q7Z4P5 450 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 FJX1Q86VR8 437 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 LINC00471Q8N535 108 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 SCAIQ8N9R8 606 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 CLEC18CQ8NCF0 446 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 RNF217Q8TC41 542 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 PRR14Q9BWN1 585 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 NMNAT1Q9HAN9 279 aaPredicted RBP11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
SPTLC1-204ENST00000469778 LOC102725191A0A1B0GVB3 256 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 TCRBV5S2A0A599 114 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 LIPT2A6NK58 231 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 GPR171O14626 319 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 LYPD3O95274 346 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 H1F0P07305 194 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 RAP2AP10114 183 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 CCNA2P20248 432 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 TNFRSF1BP20333 461 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 CTSSP25774 331 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 CHRNB4P30926 498 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 MAGEA2P43356 314 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 EGR4Q05215 589 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF239Q16600 458 aaKnown RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 ANKDD1AQ495B1 522 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 RRM2BQ7LG56 351 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 MAMDC2Q7Z304 686 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 CDK20Q8IZL9 346 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF808Q8N4W9 903 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 FNDC9Q8TBE3 224 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 PIGXQ8TBF5 258 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 ACOT11Q8WXI4 607 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 GMPPAQ96IJ6 420 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 ARL5BQ96KC2 179 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 PRSS27Q9BQR3 290 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 SFXN3Q9BWM7 321 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 OR11A1Q9GZK7 315 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 COQ10BQ9H8M1 238 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 KRCC1Q9NPI7 259 aaPredicted RBP11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 KLHL9Q9P2J3 617 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 MED31Q9Y3C7 131 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 MYO18BQ8IUG5 2567 aa11.31□□□□□ -0.6
SPTLC1-204ENST00000469778 A0A1W2PNR3 127 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 TCRBV3S1A0A5B6 114 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 DHRS12A0PJE2 317 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNF724A8MTY0 619 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 FTCDNL1E5RQL4 147 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 H0YC42 278 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 DVL2O14641 736 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 ZNHIT1O43257 154 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 CYTIPO60759 359 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 SEMA7AO75326 666 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 AGFG2O95081 481 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 PRSS23O95084 383 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 MT-ND1P03886 318 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 OPN1LWP04000 364 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 FPR1P21462 350 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 GTF2E2P29084 291 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 SHC1P29353 583 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 IFNGR2P38484 337 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 HMGA2P52926 109 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 SLC16A1P53985 500 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 NUP107P57740 925 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 OR2B6P58173 313 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 VLDLRP98155 873 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 IQCCQ4KMZ1 466 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 SEM1Q6ZVN7 128 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 FCRLAQ7L513 359 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 ZDHHC21Q8IVQ6 265 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 MCEMP1Q8IX19 187 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 ADPRHL1Q8NDY3 354 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 LILRB4Q8NHJ6 448 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 RNF128Q8TEB7 428 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 TMEM239Q8WW34 195 aa11.3□□□□□ -0.6
SPTLC1-204ENST00000469778 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms