RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 CLEC4MQ9H2X3 399 aaPredicted RBP11.11□□□□□ -0.63
VARS2-205ENST00000469358 SRMSQ9H3Y6 488 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 HRASLSQ9HDD0 168 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 THAP10Q9P2Z0 257 aaPredicted RBP11.11□□□□□ -0.63
VARS2-205ENST00000469358 RPS6KB2Q9UBS0 482 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 TBC1D3DA0A087WVF3 549 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 TBC1D3IA0A087WXS9 549 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 TBC1D3LB9A6J9 549 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 DBIP07108 87 aaKnown RBP11.11□□□□□ -0.63
VARS2-205ENST00000469358 SLC35G6P0C7Q6 338 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 TBC1D3HP0C7X1 549 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 CCR9P51686 369 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 PPP2CBP62714 309 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 PPP2CAP67775 309 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 AANATQ16613 207 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 TBC1D3CQ6IPX1 549 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 TBC1D3Q8IZP1 549 aaPredicted RBP11.11□□□□□ -0.63
VARS2-205ENST00000469358 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 UXS1Q8NBZ7 420 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 RAB7BQ96AH8 199 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 OR2A5Q96R48 311 aa11.11□□□□□ -0.63
VARS2-205ENST00000469358 LYARQ9NX58 379 aaKnown RBP11.11□□□□□ -0.63
VARS2-205ENST00000469358 IGKV1D-16P01601 117 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 RPL4P36578 427 aaKnown RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 PPP1CAP62136 330 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 TFF2Q03403 129 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 PDGFRLQ15198 375 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 HSD17B12Q53GQ0 312 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 EIPR1Q53HC9 387 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 TCTE1Q5JU00 501 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 FAM199XQ6PEV8 388 aaPredicted RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 FAM198BQ6UWH4 519 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 CDH24Q86UP0 819 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 SMIM19Q96E16 107 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 TRAF4Q9BUZ4 470 aaPredicted RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 SLC17A9Q9BYT1 436 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 PLA2G2FQ9BZM2 168 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 ZNF69Q9UC07 566 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 DTX4Q9Y2E6 619 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 PCDHGA9Q9Y5G4 932 aaKnown RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 B3GALT2O43825 422 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 GMFGO60234 142 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 UCHL1P09936 223 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 NUDT1P36639 197 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 ERVK-25P63136 954 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 HSF2Q03933 536 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 DEFB110Q30KQ9 67 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 CDONQ4KMG0 1287 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 PRRT3Q5FWE3 981 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 FHL5Q5TD97 284 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 ENPP7Q6UWV6 458 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 GATSQ8NAP1 163 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 OR1E3Q8WZA6 343 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 APOOQ9BUR5 198 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 TMEM27Q9HBJ8 222 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 C19orf53Q9UNZ5 99 aaPredicted RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 NPFFR2Q9Y5X5 522 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 OR6C68A6NDL8 312 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 MEIS3P1A6NDR6 274 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 M0R233 179 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 KHDRBS3O75525 346 aaKnown RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 CXCL2P19875 107 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 LCN1P31025 176 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 LSSP48449 732 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 PGDP52209 483 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 HTRA4P83105 476 aaPredicted RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 MELKQ14680 651 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 KIRREL2Q6UWL6 708 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 SLC35F2Q8IXU6 374 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 OR56B4Q8NH76 319 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 SMIM4Q8WVI0 70 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 HSPA12BQ96MM6 686 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 TIMM29Q9BSF4 260 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
VARS2-205ENST00000469358 KCNK15Q9H427 330 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 LIN7BQ9HAP6 207 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 RDH8Q9NYR8 311 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 UBQLN2Q9UHD9 624 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 CAMK2AQ9UQM7 478 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 SLC17A4Q9Y2C5 497 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 PCDHGA5Q9Y5G8 931 aa11.1□□□□□ -0.63
VARS2-205ENST00000469358 OR6C74A6NCV1 312 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 NUPL2O15504 423 aaKnown RBP11.09□□□□□ -0.63
VARS2-205ENST00000469358 PEX14O75381 377 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 THBS1P07996 1170 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 SRMP19623 302 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 ACTR1BP42025 376 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 ARFIP1P53367 373 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 ACTR1AP61163 376 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 COL28A1Q2UY09 1125 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 OR5M10Q6IEU7 315 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 GALNT11Q8NCW6 608 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 OR52R1Q8NGF1 315 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 RGP1Q92546 391 aaPredicted RBP11.09□□□□□ -0.63
VARS2-205ENST00000469358 RIT1Q92963 219 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 ELMOD3Q96FG2 381 aa11.09□□□□□ -0.63
VARS2-205ENST00000469358 OR1F2PQ96R84 312 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms