RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 SLC35A1P78382 337 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 MS4A2Q01362 244 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 FOXF2Q12947 444 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 PIN1Q13526 163 aaPredicted RBP10.68□□□□□ -0.7
VPS13D-204ENST00000469054 EEF1A1P5Q5VTE0 462 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 C5orf46Q6UWT4 87 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 LINC00114Q6XXX2 140 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 FCRLAQ7L513 359 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 GCNT2Q8N0V5 402 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 RNF128Q8TEB7 428 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 ZHX1-C8orf76Q96EF9 292 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 SLC41A3Q96GZ6 507 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 PYURFQ96I23 114 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 MPP4Q96JB8 637 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 SFXN3Q9BWM7 321 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 TAPBPLQ9BX59 468 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 GLRX2Q9NS18 164 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 RIMS3Q9UJD0 308 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 SLC7A7Q9UM01 511 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 HELZ2Q9BYK8 2649 aaKnown RBP10.68□□□□□ -0.7
VPS13D-204ENST00000469054 A0A1W2PNV4 684 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 LIPT2A6NK58 231 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 SMAD9O15198 467 aaKnown RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 GSC2O15499 205 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 OR2T1O43869 369 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 EIF1BO60739 113 aaKnown RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 CYTIPO60759 359 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 TNFSF13O75888 250 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 AHSA1O95433 338 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 PLGP00747 810 aaPredicted RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 GPIP06744 558 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 THRBP10828 461 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 KLK2P20151 261 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 BMP5P22003 454 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 IFNA8P32881 189 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 KIR2DL2P43627 348 aaPredicted RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 H3F3AP84243 136 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 RNPS1Q15287 305 aaKnown RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 GUSBP1Q15486 140 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 OR7A5Q15622 319 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 SLC25A35Q3KQZ1 300 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 LCN8Q6JVE9 175 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 PGM2L1Q6PCE3 622 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 CYP2R1Q6VVX0 501 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 WDR88Q6ZMY6 472 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 GDF7Q7Z4P5 450 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 DHFR2Q86XF0 187 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 MCEMP1Q8IX19 187 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 FAM86B1Q8N7N1 296 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 MFSD8Q8NHS3 518 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 ABHD3Q8WU67 409 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 CCDC124Q96CT7 223 aaKnown RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 ASB9Q96DX5 294 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 KTI12Q96EK9 354 aaPredicted RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 GMPPAQ96IJ6 420 aaPredicted RBP10.67□□□□□ -0.7
VPS13D-204ENST00000469054 PRRC1Q96M27 445 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 EPYCQ99645 322 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 PRSS27Q9BQR3 290 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 PTDSS2Q9BVG9 487 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 UCK2Q9BZX2 261 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 KLHL9Q9P2J3 617 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 A4GNTQ9UNA3 340 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 ENPP4Q9Y6X5 453 aa10.67□□□□□ -0.7
VPS13D-204ENST00000469054 MYO18BQ8IUG5 2567 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 TRAV36DV7A0A075B6V5 113 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 FAM90A27PA6NNH2 459 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 FTCDNL1E5RQL4 147 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 J3KTA2 159 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 SS18L1O75177 396 aaPredicted RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 STAMBPO95630 424 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 ATP6V1B2P21281 511 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 RPS5P46782 204 aaKnown RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 YAP1P46937 504 aaKnown RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 RASGEF1BQ0VAM2 473 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 TRAP1Q12931 704 aaKnown RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 MTX3Q5HYI7 312 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 FAM69AQ5T7M9 428 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 TTC33Q6PID6 262 aaPredicted RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 PAQR6Q6TCH4 344 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 FAM214BQ7L5A3 538 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 TSEN54Q7Z6J9 526 aaKnown RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 P3H2Q8IVL5 708 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 CCDC103Q8IW40 242 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 CNEP1R1Q8N9A8 125 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 RELL2Q8NC24 303 aaPredicted RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 OR6S1Q8NH40 331 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 TAAR8Q969N4 342 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 STARD4Q96DR4 205 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 C7orf34Q96L11 122 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 NAA11Q9BSU3 229 aaPredicted RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 ZNF426Q9BUY5 554 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 FNDC11Q9BVV2 318 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 CADM1Q9BY67 442 aaKnown RBP10.66□□□□□ -0.7
VPS13D-204ENST00000469054 GP6Q9HCN6 339 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 KCNJ16Q9NPI9 418 aa10.66□□□□□ -0.7
VPS13D-204ENST00000469054 CLEC4AQ9UMR7 237 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms