RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 RPL14P50914 215 aaKnown RBP15.13■□□□□ 0.01
TRIM56-203ENST00000467847 VLDLRP98155 873 aa15.13■□□□□ 0.01
TRIM56-203ENST00000467847 TGFBR3Q03167 851 aa15.13■□□□□ 0.01
TRIM56-203ENST00000467847 CHRNB3Q05901 458 aa15.13■□□□□ 0.01
TRIM56-203ENST00000467847 SYPL1Q16563 259 aa15.13■□□□□ 0.01
TRIM56-203ENST00000467847 CCDC115Q96NT0 180 aa15.13■□□□□ 0.01
TRIM56-203ENST00000467847 KCNK17Q96T54 332 aa15.13■□□□□ 0.01
TRIM56-203ENST00000467847 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.13■□□□□ 0.01
TRIM56-203ENST00000467847 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 BIRC5O15392 142 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 F12P00748 615 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-203ENST00000467847 CHRM4P08173 479 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 UQCRBP14927 111 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 LBPP18428 481 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 SLC1A3P43003 542 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 SLC25A3Q00325 362 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 GNA13Q14344 377 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 SLC17A1Q14916 467 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 TSPO2Q5TGU0 170 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 PAQR6Q6TCH4 344 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 TRIML2Q8N7C3 387 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 AENQ8WTP8 325 aaKnown RBP15.12■□□□□ 0.01
TRIM56-203ENST00000467847 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 TRIM44Q96DX7 344 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-203ENST00000467847 SORT1Q99523 831 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 NUF2Q9BZD4 464 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 C20orf27Q9GZN8 174 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 SLC38A1Q9H2H9 487 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 BTNL2Q9UIR0 455 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 PMF1-BGLAPU3KQ54 211 aa15.12■□□□□ 0.01
TRIM56-203ENST00000467847 ZC3H12DA2A288 527 aaKnown RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 CFAP73A6NFT4 308 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 CCDC154A6NI56 674 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 ATP6V1G2-DDX39BF2Z307 99 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 FAAHO00519 579 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 PHF1O43189 567 aaPredicted RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 SNUPNO95149 360 aaKnown RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 CSF3P09919 207 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 IL7RP16871 459 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 MPGP29372 298 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 APOBEC3AP31941 199 aaPredicted RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 SLC1A6P48664 564 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 ANXA11P50995 505 aaKnown RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 MAP2K6P52564 334 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 EFNA4P52798 201 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 NME5P56597 212 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 OTUD3Q5T2D3 398 aaPredicted RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 MRPL2Q5T653 305 aaKnown RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 CYB5R2Q6BCY4 276 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 KLHL24Q6TFL4 600 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 LRRC74BQ6ZQY2 392 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 LRRC34Q8IZ02 419 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 C10orf105Q8TEF2 133 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 PANX1Q96RD7 426 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 TMEM109Q9BVC6 243 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 BEX2Q9BXY8 128 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 MTHFD2LQ9H903 347 aaPredicted RBP15.11■□□□□ 0.01
TRIM56-203ENST00000467847 MALRD1Q5VYJ5 2156 aa15.11■□□□□ 0.01
TRIM56-203ENST00000467847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM56-203ENST00000467847 WNT11O96014 354 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 NR2F1P10589 423 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 CDH2P19022 906 aaPredicted RBP15.1■□□□□ 0.01
TRIM56-203ENST00000467847 USF1P22415 310 aaPredicted RBP15.1■□□□□ 0.01
TRIM56-203ENST00000467847 PRPS1P60891 318 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 UFM1P61960 85 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 TXNL4AP83876 142 aaKnown RBP15.1■□□□□ 0.01
TRIM56-203ENST00000467847 EPS8Q12929 822 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 KRT71Q3SY84 523 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 C1QTNF12Q5T7M4 302 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 KIRREL3Q8IZU9 778 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 OR9K2Q8NGE7 335 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 PROX1Q92786 737 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 TMEM45BQ96B21 275 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 TEX37Q96LM6 180 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 MEAF6Q9HAF1 191 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 TMEM160Q9NX00 188 aa15.1■□□□□ 0.01
TRIM56-203ENST00000467847 LIPT2A6NK58 231 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 TM9SF1O15321 606 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 RGS16O15492 202 aaPredicted RBP15.09■□□□□ 0.01
TRIM56-203ENST00000467847 LY6HO94772 140 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 AKR7A3O95154 331 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 GPIP06744 558 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 DBIP07108 87 aaKnown RBP15.09■□□□□ 0.01
TRIM56-203ENST00000467847 ZNF16P17020 682 aaPredicted RBP15.09■□□□□ 0.01
TRIM56-203ENST00000467847 BGNP21810 368 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 RPS4Y1P22090 263 aaKnown RBP15.09■□□□□ 0.01
TRIM56-203ENST00000467847 CXCR1P25024 350 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 CDKN2CP42773 168 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 CEACAM7Q14002 265 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 OR7A5Q15622 319 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 HIKESHIQ53FT3 197 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 COX20Q5RI15 118 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 ZNF621Q6ZSS3 439 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 AAED1Q7RTV5 226 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 GPAT4Q86UL3 456 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 ZNF440Q8IYI8 595 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 TMEM99Q8N816 258 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 ZIC4Q8N9L1 334 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 POMGNT2Q8NAT1 580 aa15.09■□□□□ 0.01
TRIM56-203ENST00000467847 PNPT1Q8TCS8 783 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms