RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ATP6AP1Q15904 470 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 HBMQ6B0K9 141 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 MBOAT2Q6ZWT7 520 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 CD163Q86VB7 1156 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 ATCAYQ86WG3 371 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 UBQLNLQ8IYU4 475 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 ATP6V1C2Q8NEY4 427 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 OR4C15Q8NGM1 316 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 KTI12Q96EK9 354 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-205ENST00000466897 REEP1Q9H902 201 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 CALHM2Q9HA72 323 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 MEPEQ9NQ76 525 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-205ENST00000466897 TNFRSF10DQ9UBN6 386 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 ZNF175Q9Y473 711 aa13.63□□□□□ -0.23
NPHP4-205ENST00000466897 POLEQ07864 2286 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 A0A1W2PNR3 127 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 SH3PXD2BA1X283 911 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ARRDC5A6NEK1 342 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 CD8B2A6NJW9 211 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 LIPT2A6NK58 231 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 H0YC42 278 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 H3BNX3 289 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 SULT2B1O00204 365 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 CLOCKO15516 846 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 EIF1BO60739 113 aaKnown RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 STSP08842 583 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 IMPDH2P12268 514 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 FASP25445 335 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ACVR2AP27037 513 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 EIF1AXP47813 144 aaKnown RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 AGFG1P52594 562 aaKnown RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 TPD52P55327 224 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 CARD18P57730 90 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 H3F3AP84243 136 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 SRYQ05066 204 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 C3AR1Q16581 482 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ZNF239Q16600 458 aaKnown RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ACSF3Q4G176 576 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 FGD3Q5JSP0 725 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 PODNL1Q6PEZ8 512 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ZNF730Q6ZMV8 503 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 CHMP1BQ7LBR1 199 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 DOLPP1Q86YN1 238 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 MED12LQ86YW9 2145 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 LIPHQ8WWY8 451 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 OSTF1Q92882 214 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ZHX1-C8orf76Q96EF9 292 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ALPK1Q96QP1 1244 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 TAPBPLQ9BX59 468 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 FKRPQ9H9S5 495 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 S100A14Q9HCY8 104 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 KRCC1Q9NPI7 259 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 CLCF1Q9UBD9 225 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 TMEM5Q9Y2B1 443 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 SAMHD1Q9Y3Z3 626 aaKnown RBP13.62□□□□□ -0.23
NPHP4-205ENST00000466897 CORINQ9Y5Q5 1042 aa13.62□□□□□ -0.23
NPHP4-205ENST00000466897 TRBV4-1A0A0J9YWV2 114 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 CLCA1A8K7I4 914 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 TIPRLO75663 272 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 LDLRP01130 860 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 BGLAPP02818 100 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 OPN1LWP04000 364 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 FCGR2AP12318 317 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 DNAJA1P31689 397 aaKnown RBP13.61□□□□□ -0.23
NPHP4-205ENST00000466897 CA7P43166 264 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 RPS5P46782 204 aaKnown RBP13.61□□□□□ -0.23
NPHP4-205ENST00000466897 CASP6P55212 293 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 PRKCDQ05655 676 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 ZNF74Q16587 644 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 C1QL3Q5VWW1 255 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 NSUN5P2Q63ZY6 315 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 PAQR6Q6TCH4 344 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 RRM2BQ7LG56 351 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 SCAIQ8N9R8 606 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 ADPRHL1Q8NDY3 354 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 OR4K5Q8NGD3 323 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 OR5M9Q8NGP3 310 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 OR52J3Q8NH60 311 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 STMN2Q93045 179 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 TAAR8Q969N4 342 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 NRBF2Q96F24 287 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 PSD2Q9BQI7 771 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 BDH2Q9BUT1 245 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 VNN3Q9NY84 501 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 ZNF229Q9UJW7 825 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 MCTS1Q9ULC4 181 aaKnown RBP13.61□□□□□ -0.23
NPHP4-205ENST00000466897 TMCC3Q9ULS5 477 aa13.61□□□□□ -0.23
NPHP4-205ENST00000466897 ESPL1Q14674 2120 aa13.6□□□□□ -0.23
NPHP4-205ENST00000466897 MBD3L4A6NDZ8 208 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-205ENST00000466897 MBD3L3A6NE82 208 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-205ENST00000466897 MBD3L5A6NJ08 208 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-205ENST00000466897 ENO4A6NNW6 628 aa13.6□□□□□ -0.23
NPHP4-205ENST00000466897 GNGT2O14610 69 aa13.6□□□□□ -0.23
NPHP4-205ENST00000466897 CXCL13O43927 109 aa13.6□□□□□ -0.23
NPHP4-205ENST00000466897 FPR1P21462 350 aa13.6□□□□□ -0.23
NPHP4-205ENST00000466897 IFNGR2P38484 337 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms