RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MBD3L5A6NJ08 208 aaPredicted RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 AHSA1O95433 338 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 H1F0P07305 194 aaKnown RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 IMPDH2P12268 514 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 FCGR2AP12318 317 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 ACTR3P61158 418 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 CCNIQ14094 377 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 ZNF239Q16600 458 aaKnown RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 EIF2S3LQ2VIR3 472 aaKnown RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 C4orf17Q53FE4 359 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 FAM69AQ5T7M9 428 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 TMEM211Q6ICI0 200 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 MED12LQ86YW9 2145 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 MFSD8Q8NHS3 518 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 MBD3L2Q8NHZ7 208 aaPredicted RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 PRR7Q8TB68 274 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 TMEM239Q8WW34 195 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 WNT2BQ93097 391 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 ZHX1-C8orf76Q96EF9 292 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 ZNF845Q96IR2 970 aaPredicted RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 RSRC1Q96IZ7 334 aaKnown RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 TRIB1Q96RU8 372 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 DMRTA2Q96SC8 542 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 PTDSS2Q9BVG9 487 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 TAPBPLQ9BX59 468 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 RHCGQ9UBD6 479 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 MCTS1Q9ULC4 181 aaKnown RBP14.34□□□□□ -0.11
GPC1-207ENST00000466624 AURKCQ9UQB9 309 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 MEMO1Q9Y316 297 aa14.34□□□□□ -0.11
GPC1-207ENST00000466624 LIPT2A6NK58 231 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 SLC22A20A6NK97 555 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 FTCDNL1E5RQL4 147 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 EIF1BO60739 113 aaKnown RBP14.33□□□□□ -0.12
GPC1-207ENST00000466624 KRT36O76013 467 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 SYNGR4O95473 234 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 TIMP3P35625 211 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 AGFG1P52594 562 aaKnown RBP14.33□□□□□ -0.12
GPC1-207ENST00000466624 SLC35A1P78382 337 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 GK3PQ14409 553 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 PON3Q15166 354 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 C1QL3Q5VWW1 255 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 MTFR2Q6P444 385 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 C10orf67Q8IYJ2 551 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 RNF113BQ8IZP6 322 aaKnown RBP14.33□□□□□ -0.12
GPC1-207ENST00000466624 TMEM255BQ8WV15 326 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 ACOT11Q8WXI4 607 aaPredicted RBP14.33□□□□□ -0.12
GPC1-207ENST00000466624 KTI12Q96EK9 354 aaPredicted RBP14.33□□□□□ -0.12
GPC1-207ENST00000466624 ZFP3Q96NJ6 502 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 TM9SF2Q99805 663 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 TTYH2Q9BSA4 534 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 CHID1Q9BWS9 393 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 SRXN1Q9BYN0 137 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.12
GPC1-207ENST00000466624 NCOA6Q14686 2063 aaPredicted RBP14.33□□□□□ -0.12
GPC1-207ENST00000466624 J3QKU1 62 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 CCL21O00585 134 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 FKBP6O75344 327 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 DIRAS1O95057 198 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 GADD45GO95257 159 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 MT-ATP6P00846 226 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 MT-ND1P03886 318 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 ENPP1P22413 925 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 RPS5P46782 204 aaKnown RBP14.32□□□□□ -0.12
GPC1-207ENST00000466624 HMGA2P52926 109 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 UGT2B15P54855 530 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 H3F3AP84243 136 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 SPIBQ01892 262 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 RIPPLY2Q5TAB7 128 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 RPTNQ6XPR3 784 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 SEM1Q6ZVN7 128 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 SLC43A2Q8N370 569 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 FNDC9Q8TBE3 224 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 SLC7A13Q8TCU3 470 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 TAAR8Q969N4 342 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 SLCO4A1Q96BD0 722 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 FUZQ9BT04 418 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 MEPEQ9NQ76 525 aaPredicted RBP14.32□□□□□ -0.12
GPC1-207ENST00000466624 ARMC1Q9NVT9 282 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 SH3BGRL2Q9UJC5 107 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 MED31Q9Y3C7 131 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 TESMINQ9Y4I5 508 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 MYO7BQ6PIF6 2116 aa14.32□□□□□ -0.12
GPC1-207ENST00000466624 A0A087WUU8 490 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 SMAD9O15198 467 aaKnown RBP14.31□□□□□ -0.12
GPC1-207ENST00000466624 BGLAPP02818 100 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 GLI4P10075 376 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 FUT4P22083 530 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 RRM2P31350 389 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 CEACAM8P31997 349 aaPredicted RBP14.31□□□□□ -0.12
GPC1-207ENST00000466624 LIMS1P48059 325 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 OR2B6P58173 313 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 KPNB1Q14974 876 aaKnown RBP14.31□□□□□ -0.12
GPC1-207ENST00000466624 OR7A5Q15622 319 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 GTF2IRD2BQ6EKJ0 949 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 OR2T5Q6IEZ7 315 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 OR2A2Q6IF42 318 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 PAQR6Q6TCH4 344 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 C3P1Q6ZMU1 363 aa14.31□□□□□ -0.12
GPC1-207ENST00000466624 FCRLAQ7L513 359 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms