RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	TRMU	O75648	421 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SORBS2	O94875	1100 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RPP14	O95059	124 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NSA2	O95478	260 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LY6G6D	O95868	133 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TNNC2	P02585	160 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CALB1	P05937	261 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SAG	P10523	405 aa	Predicted RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	IRF2	P14316	349 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TCP1	P17987	556 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CD27	P26842	260 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PDHA2	P29803	388 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ALDH4A1	P30038	563 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CHRNA7	P36544	502 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NPY2R	P49146	381 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CSNK1E	P49674	416 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NPY4R	P50391	375 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GBX2	P52951	348 aa	Predicted RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NUP107	P57740	925 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RBP5	P82980	135 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TMEM132D	Q14C87	1099 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MORF4L2	Q15014	288 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	P2RY6	Q15077	328 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TAF13	Q15543	124 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TEAD2	Q15562	447 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PPP1R3A	Q16821	1122 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FFAR4	Q5NUL3	377 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ARHGAP17	Q68EM7	881 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DEGS2	Q6QHC5	323 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LINC00299	Q6ZSB3	139 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278		Q6ZTC4	211 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ARC	Q7LC44	396 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TAC4	Q86UU9	113 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NT5DC3	Q86UY8	548 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PIGZ	Q86VD9	579 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	UNC93A	Q86WB7	457 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HIPK1	Q86Z02	1210 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MMD2	Q8IY49	270 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MCOLN2	Q8IZK6	566 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR9A1P	Q8NGU1	263 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR4C3	Q8NH37	302 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TCP10L	Q8TDR4	215 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PAQR8	Q8TEZ7	354 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC13A3	Q8WWT9	602 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PRCC	Q92733	491 aa	Predicted RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PROX1	Q92786	737 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	F2RL3	Q96RI0	385 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CCT8L2	Q96SF2	557 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NAPG	Q99747	312 aa	Predicted RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TDRD1	Q9BXT4	1180 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR2B2	Q9GZK3	357 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SHARPIN	Q9H0F6	387 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HDHD2	Q9H0R4	259 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NXF3	Q9H4D5	531 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NT5M	Q9NPB1	228 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACP6	Q9NPH0	428 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SCRT2	Q9NQ03	307 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZC4H2	Q9NQZ6	224 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FGF21	Q9NSA1	209 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CISH	Q9NSE2	258 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	P4HTM	Q9NXG6	502 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GUCA1B	Q9UMX6	200 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SNX12	Q9UMY4	172 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RUVBL2	Q9Y230	463 aa	Known RBP	4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACOT9	Q9Y305	439 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZAN	Q9Y493	2812 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MYOF	Q9NZM1	2061 aa		4.37	□□□□□ -1.71
CACNA1C-223	ENST00000465278	IGHV4-61	A0A0C4DH41	118 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278		A0A0U1RQV5	110 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PQLC2L	A1A4F0	135 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FAM25A	B3EWG3	89 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FAM25C	B3EWG5	89 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FAM25G	B3EWG6	89 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278		F8W036	122 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278		K7EM74	188 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278		K7EQS6	105 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TXNDC9	O14530	226 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DFNA5	O60443	496 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CCDC22	O60826	627 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TNFSF15	O95150	251 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MOCS3	O95396	460 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	IGHV4-59	P01825	116 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FGF4	P08620	206 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KRT16	P08779	473 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PATE4	P0C8F1	98 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OCM2	P0CE71	109 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OCM	P0CE72	109 aa	Predicted RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CFC1B	P0CG36	223 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CFC1	P0CG37	223 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ICAM2	P13598	275 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PRG2	P13727	222 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CBR1	P16152	277 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	GABRG2	P18507	467 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	WARS	P23381	471 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	VHL	P40337	213 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KIR3DL2	P43630	455 aa		4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CDK9	P50750	372 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MAZ	P56270	477 aa	Known RBP	4.36	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EIF3E	P60228	445 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms